Sylvia atricapilla (blackcap): 136370165
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Entry
136370165 CDS
T10263
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136370165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136370165
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136370165
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Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
YVC1_C
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
136370165
NCBI-ProteinID:
XP_066189555
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Position
20:7725817..7737341
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AA seq
856 aa
AA seq
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MSSILGKMKKFGSFDMEDSEVTDEHTDGEDSVQEAPDNSQGPPTTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLVAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDTYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKDGKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNISDYSRCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQVCLCSLLSLVWQR
AITILDIENSYLNCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINE
DPGYSGDLRRNASFSLKPGRVSGKHWKTLVPLLKDGEKRREEPHKLPEEVKLKPVLEPYF
EPEDSEGLKESIPKSV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggactctgaa
gtgacagatgaacacacagatggggaggactctgtccaggaagcccctgacaactcccag
ggcccacccaccaccaaggtgcagccacccaaaagcaacatttttgcaagacggggccgt
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctggtggcaccttctgtcatcaaattccacgtcaatttggagaggggcaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaatagaaccttcaagcatctcactgatgaggagttcaaagagcctgaaact
ggcaaaacctgtctactgaaagcaatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacacctactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaacggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaac
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggaacccctcaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttgttt
tacttcaacttctttgtctacaccatgcacatcaccatcctcactgcagctgcttactac
agacctgtacagaaggatggaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttcagaggg
atccagtatttcgtgcagaggcgcccatcactcaggacgctgatagttgatggctacagt
gaggttcttttctttgtgcactctctgctcctcctgagctctgtggtgctgtacttctgt
ggccaggagctctacgtggcttccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccggggcttccagcagatgggcatttactccgtcatgatcgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatctcgtattcctcttgggattttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggacacaaatatctctgat
tattcccggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggagacctggagttcacagagaactac
aggttcaaatctgtgtttgtcatcctgctggtgctctatgtcatcctcacctatatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaagattgcccaggagagc
aagagcatctggaaactccaggtgtgtttgtgctctctgctctctcttgtttggcagaga
gccatcaccatcctggacattgagaacagctacctgaactgcctgaggcactcattccgc
tctgggaagcaagtcctggtggggatcacacctgatggccaagatgattacaggtggtgc
ttcagggttgatgaagtgaactggtccacatggaacactaatctgggcataatcaatgaa
gaccctgggtactctggggacctcagacgaaatgccagtttctctcttaagcctggcaga
gtttcagggaagcactggaaaacgttggttccacttctaaaagatggagagaagaggaga
gaagagccacacaagctgccagaagaagtcaaattaaaacctgttttggagccttatttt
gagccagaagattctgaggggttgaaagagtcaattccaaagtcagtctaa
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