Sylvia atricapilla (blackcap): 136370243
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Entry
136370243 CDS
T10263
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03040
Spliceosome
sati05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136370243 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136370243 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136370243 (SRSF1)
Spliceosome [BR:
sati03041
]
Common components
Common spliceosomal components
SR proteins
136370243 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
136370243
NCBI-ProteinID:
XP_066189662
LinkDB
All DBs
Position
20:10058871..10062797
Genome browser
AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcggcgtcatccgcggcccggccggcaacaacgactgccgcatctacgtg
gggaacctgccccccgacatccgcaccaaggacatcgaggacgtgttctacaagtacggc
gccatccgcgacatcgacttgaagaaccgccgcgggggcccgcccttcgccttcgtcgag
tttgaggaccccagggacgcggaggacgccgtctacgggcgggacggctacgactacgat
gggtatcgcctccgcgtggagttccctcggagcggccgcggcaccggcagaggcggcggc
ggcggcggagggggaggagccccccggggcaggtatggccccccgtcccggcgctcggag
tacagagtgatcgtctcggggctgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggcactggtgtcgtg
gagtttgtgcggaaggaagacatgacctacgctgtgcgaaagctggataacactaaattt
agatctcacgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagccca
agctatggaagatctcggtcccgcagccgtagtcgtagcaggagccgtagtcgaagcaac
agcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgc
cacagcagatcccgatctcgtacataa
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