Sylvia atricapilla (blackcap): 136370370 Help Entry 136370370         CDS       T10263                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism sati  Sylvia atricapilla (blackcap) Pathway sati03013   Nucleocytoplasmic transport sati03040   Spliceosome Brite KEGG Orthology (KO) [BR:sati00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     136370370 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     136370370 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sati03019]     136370370 (THOC2)    03041 Spliceosome [BR:sati03041]     136370370 (THOC2) Messenger RNA biogenesis [BR:sati03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      136370370 (THOC2) Spliceosome [BR:sati03041]  Complex C   Other components    EJC/TREX     136370370 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     136370370 (THOC2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  136370370 NCBI-ProteinID:  XP_066189829 LinkDB All DBs Position 21:9444792..9488666 Genome browser AA seq 1594 aa AA seqDB search MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIV EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI MDQMPPFYSTSHKAIAVALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYV ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK SSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG PGGAGMPTSLTINTVRLEEGAAEETADKLKEKSQGVVKVINKTVNATPKVTTSNGNSASN SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERVNKDEKAREIKEK TPKSEKEKEKVKKEEKASKEEKSKTVVTIIESKSSAEKEREKEPSRERDLAKEMKSKENA KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHY INHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNNEREVPQDSTKR RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKK ESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR NT seq 4785 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag tttgtgcagctctgtcgtgctctcagtgaaaacaaaaaccatgatgtgggtttcagagat attcagcaggctttgtatgagcttgcttaccacgttgtcagaggaaacctaaagcatgat caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatccta gctgatgtgttctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg gatcattttacacaactggtattggcctgtttgtatcttgtatctgacactgtcctaaag gagcgtttagatccagagaccctggagtcactgggactcatcaagcagtctcaacagttc aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg ctaagagaggagaatgaaggttatgcaaagctcattgcagaactgggtcaagacttatct ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat cttgatcctaacagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat gatgatttctttgtgccactgatagagtcttacatgtacatgtgtgaacctcaaactcta tgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagaccccttcc tccttatacagagttgctgctgtccttttgcaacataacctcatagatttggaagatctt tatgttcatctcctcccgggggataatgccatcattgaggaacacaagcgggagatagtg gaagccaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag gaaaaagagaaagagaaggaaaaagaggaggagaaaactgaaaagcctcctgataatcag aaacttggattgttggaggccttgttgaagattggtgactggcaccatgctcagagcatc atggatcagatgcctcccttttactccacgtcccacaaggccatcgccgtcgcgctgtgc cagctggtgcacgtcaccattgagcctctgtaccgcagagttggtgtacctaaaggagct aaggggtcaccaatctcctctttgccaaacaagagggcaccaaaacaagcagagagcttt gaagagttgagaaaggaagtgttcaacatgctttgttaccttggtcctcacctgtcccac gatcccattttatttgcaaaagtcgtgcgccttggaaaggcatttatgaaagagtttcag tctgatggaagcaagcaggaagataaagagaaaatggagaccctgttcagctgtttgctg agtattactgatcaagtcttgcttccatctctttccctgatggactgcaatgcctgcatg tctgaggagctgtggggaatgttcaaaacctttccctaccagtaccggtaccgtctctat gggcagtggaagaatgaaacttacaatagtcacccacttcttgtgaaggtcaaagctcaa accatagacagagccaaatacatcatgaagcgcttaacgaaggaaaatgtgaaaccctct ggaagacaaattgggaagctcagccacagcaatcctacaattttatttgattatatttta tcacaaatacaaaaatatgataacctgataactccggtggttgattccctgaagtacctc acttccctgaactatgatgtcttggcatattgtatcattgaagcattggcaaaccctgag aaggagagaatgaagcatgatgacactacaatctcaagctggctgcaaagtctggcaagt ttttgtggtgctgttttccgaaaataccccattgaacttgcaggcctcctgcagtatgtg gccaaccagctgaaagctggcaagagctttgatttgcttattttaaaagaggtggtgcag aagatggcagggatagaaattactgaagaaatgacgatggaacagttggaagccatgaca ggtggagaacagctgaaagctgagggtggatactttggccaaatcaggaacacgaagaaa tcatctcagagattaaaagatgcattattggaccatgatcttgctctcccactgtgcctg cttatggctcagcagagaaatggtgttgtctttcaagaaggaggggaaaaacatctgaag ctagtgggaaaactgtatgatcagtgccatgacaccctggtacagtttggtgggttttta gcatccaatctaagcacagaggattacataaagcgagtgccttctattgatgttctctgt aatgagtttcacacacctcatgatgctgcatttttcctctccaggcccatgtatgcacac cacatttcatcaaagtatgatgaactgaaaaaagctgagaagggaaataagcagcagcac aaagttcacaaatacattacatcatgtgagctggtgatggctcctgttcacgaagctgtg atttctctgcacctccccaaagtgtgggatgacatcagccctcagttctatgccacattc tggtctttaaccatgtatgaccttgctgtgccacacagcagctatgacagagaagtcaat aaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaag aaaaaagaaaaagaacgttgcacagctctgcaggacaagctccttgaagaggagaagaag cagttagagcatgtgcagagggttctgcagagactgaaactagagaaagataactggctt ctggcaaaatctaccaaaaatgagactatcaccaaatttttacagttgtgtatatttcct cgatgcattttttcggcaattgatgcagtttactgtgctcactttgttgaactggtgcat cagcagaaaacacccaacttctccacactgctctgctatgaccgggttttctctgatatt atatatacagttgcaagttgcacagaaaatgaagccagtaggtatggcaggtttttgtgc tgtatgctggagaccgtgaccaggtggcacagtgacagagtcatatatgaaaaggagtgt ggcaactatccaggcttcttaactatattacgagcaactggatttgatggtggaaataag gctgatcaattggattatgagaattttagacacgtggtacacaagtggcactataaatta actaaggcttctgtgcactgtctggaaacaggtgaatatacacatatcagaaacatcctg attgtgctgaccaaaatccttccatggtacccaaaagtgctgaacctgggtcaagccttg gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca ttggctatgggctattctggacagttgaaaagtaggaagcctttcatgatacctgaaaat gaatttcaccacaaagacccacctgccaggaatgctgtacctgccacagtgcaaaatggg ccaggtggtgctgggatgccaacgtctctcacaataaatacagttagactggaagagggc gctgctgaggagactgcagataaactaaaggagaagtctcagggtgtggtgaaagttatt aataaaactgtgaatgctacaccgaaggtgacaacaagcaatgggaacagtgcatctaat agcaaaattattaaagagaaagatgataaagaaaagagcgggaaggaaaaagataaagaa aaaaaagacaagactccagctgccactccggagatgaaggcacttgggaaagatgggaaa gataaaccgaaggaagaacgggtaaacaaagatgagaaagcaagagagatcaaggagaaa acgccaaagtctgaaaaagagaaggaaaaagtgaagaaagaagaaaaagcttccaaagaa gaaaagtccaagacggttgttaccatcattgagtccaagtcaagtgcagaaaaggagcga gaaaaggaaccgtccagagaaagagatctggcaaaggaaatgaaatcaaaggaaaatgct aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa acatcagaatctgaaagggaacaaaaacgccgcaaagtcgatacacattcttctccgtca cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac ataaaccacactactccaacactgtccaagagtaaggagagagaagtggagaagaaagat ttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa gatcgaaaaagggatcactccaacaacgagcgggaggtgccccaggactccacgaagagg cgcaaggaggagaacggcacaactggctcttcaaaacacagcaaaagcgaaagcccttct gattcccctcgcttgaatgaaaaagagaaggagaaaaacaaatctaaatcttcaggaaaa gagaaaggtgactccatcaaggcagagaagatggagaagagctcctctggtagcaaaaag gaatcaagacatgataaagaaaaaacagagaagaaagaaaaacgagacagtgctgggggg aaagaagaaaagaaacatcataaatcttcagacaagcatagataa

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