Sylvia atricapilla (blackcap): 136370395
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Entry
136370395 CDS
T10263
Name
(RefSeq) transcription factor SOX-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136370395
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136370395
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
136370395
NCBI-ProteinID:
XP_066189861
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All DBs
Position
21:2957479..2958557
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AA seq
316 aa
AA seq
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MYSMLETEMKAPQPTPGSTGGNPAAGNTGKGGGGAGNGAAAGSDQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPR
RKTKTLLKKDKYSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGY
SQHPGMNSPQLQQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGS
MGSVVKSEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQHY
QSAGTAVNGTVPLTHI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagacggagatgaaggcgccgcagcccacgccgggcagcaccggg
gggaaccccgctgccgggaacaccggcaaaggcggcggaggggccgggaacggagcggca
gcgggctcggaccaggaccgggtgaagcggcccatgaacgccttcatggtgtggtcccgc
gggcagcggaggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaaa
cgcctcggcgccgactggaagctgctgagcgacgccgagaagcggcccttcatcgacgag
gccaagcggctgcgggcggtgcacatgaaggagtatccggattacaaataccggccccgg
aggaagaccaagaccttgctgaagaaggacaaatactcgctgccaggtaacctgctggcc
ccgggcggggggaacgcggtgagcagccccgtcggggtgggccagaggattgacacttac
gctcacatgaacggctggaccaacggggcttactcgctgatgcaagaccaactgggctac
agccagcacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgacatgacg
ggcctgcagtacagccccatgatgtccactgctcagacctacatgaacgccgcctccacc
tacagcatgtcccccgccgcctacggccagcagccctccacggccatgagcctgggctcc
atgggctccgtggtgaaatccgagcccagctcgccgcctccggccatcacctctcactcg
cagagagcctgcctgggagacctgcgggatatgatcagcatgtacctgcctcccggcggg
gacgccacagacccttcggcgctgcagggcagcaggttacacagcgtgcaccagcactac
cagagtgccgggactgccgtcaatggtaccgtaccactaactcacatataa
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