Sylvia atricapilla (blackcap): 136370485
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Entry
136370485 CDS
T10263
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136370485 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136370485 (ATRX)
03036 Chromosome and associated proteins [BR:
sati03036
]
136370485 (ATRX)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
136370485 (ATRX)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
136370485 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
136370485
NCBI-ProteinID:
XP_066190018
LinkDB
All DBs
Position
21:complement(2324324..2391236)
Genome browser
AA seq
2492 aa
AA seq
DB search
MGGGGGGRRQEAGPLRLPPIRWRRGGRWRRPRLCLRPAPERGPGPGGSSAPSSDGGVMTA
EPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKKTSIGKSREPKGSPASMENNRDE
GSSSSERNKSLGSSRSKRKPTVVTKYVGSDDEQTVDETVNEDISNENSENDVDMQSLPKG
TVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVNHFQ
KDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKK
CILRNLGRKELSTILDENTQWHCYVCHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVEN
EKSKTCDHTVKFSPKRNNASCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLIETT
TNLNSSFVSFLKNAAENVEISPTMQLCQLKAFKSVLSDMKKAHLSLEEGLNLEIQALNVK
IKDKNTKEKKTEVRSEKNEVKKDEGKEHVALKEDDATQTQKKVVSEQPDNEPMDQSVPSV
EQTDNKAAPGEEKKSDRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESTMEIQMPS
DEQDSANTAAEHETLNSNTKVNAAVKDTKGGTKLKSSAKGTKELIVKLTPVSLSESTLKA
EEQDNSLEKDNQDVDASKDTDASKDVDESQPGAASCDSVKQNHSASSEPSAENDAVPAED
SDLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKQKRKASKQPRKKNDKRNSSDSA
ADGPSPNKLSKSKKPCDLDHSSDSDELPAVLKEAGRMNRSSSDSESNSETPAKNQKNLDF
PKNQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNDSDSSNYDSELEKEIK
MLSKIEAAKKSKKKCTRKDDSYDSSEEEQKKKVSSKRKVNLKKRRGKSSQDDDAEKSSPE
KEINHSSKDKKLGKRSAAKDKAKDSKENSAKGKCDESSDAEKSSLEKEENPEVKKKRDLK
KKKVQDDSSSESTEKSAKKEHKSESSKDRFKNKKGSESKAKKSEKLKKKEQDDSSSDLDK
SSAEKGSSNSSENDKVKKEPVFTGKRKLRERVAEKVHIDLSSDTEKSPQKEESSDDDAVR
HKKQTETKEKKKISHKKKISKKEQNGSSSSDEESYEDTKKKMKRGSVKESKKSNLKKKVA
KKKMVVSSSSDKEENEEDDQNSTGDGSSDEQKIRPVTESLMLSAEGGFCQSSGDEGEALS
RTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQPEKGKKKPAKQTENTG
DNGEKEKEDKKSEKEEGDSESDSEEEETSKKPRYRHRLLRQKLTVSDGESGEEKKVVKPK
DKKEGGKRRNRRKVSSDDSNDSEFQESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYK
QKKKRRRIKVQEDSSSENENKSNPENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALK
EEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVT
RLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD
FRTALVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQERSYMLQHWQDEGGV
MIIGYEMYRNLAQGRNVKSRKLKEVFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSI
RSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVR
VMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVG
GGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDET
SMSLSSDDYAKKKKSKGKKVKKDCSSSGSGSDNDVEVIKVWNSRSRGGGEGNVEDLTNNP
ASTKSDEGKATSSSNPGSPSPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVL
VFSQSLISLDLIEDFLELANREKSDKDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWA
EEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKP
VFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPN
SEKKKKRDTPMLPKDSILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYE
AEKKGITMRFNMPTGTTTMPPNFNSQTYIPYNLGALSAMSNQQLEDLINQGREKVVEAAN
SVAAARIQPLEDIISAVWKENLTLTESQVQALALNRQASQELDVKRREAIYNDVLGKQQM
LISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMGHLMMPKPPNLIMNPSNYTAIDVRGMY
QSVSGGMQPPPLQRAPPPMRGKSPGPSQGKSM
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggaggaggacggcggcaggaggccggtcccctcaggctccctccgata
agatggcggcggggcgggcgatggcggcggccgcggctttgtctgcgcccagcgcctgag
cgcggacccggcccgggcggcagctccgctccgagcagcgacggcggagtcatgaccgca
gagcccgtgagtgaaagcaagttgaatactttggtacagaaactccatgacttcttggct
cactcatcagaagaatctgaggacgccaactctcctccagcattgtctaaaaaaacaagt
ataggtaaaagtagagaacctaaaggaagcccagcttcaatggagaacaacagggatgag
ggaagtagttcttcggaaagaaacaaatccttaggatcttcccgttccaaaaggaaacct
acagttgtaacaaaatatgttgggtcagatgatgaacaaactgtagatgaaactgtaaat
gaagatatttcaaatgagaactcagagaatgatgtagatatgcaaagcttgcctaaaggt
acagtggttgtacagcctgagccagtgctgaatgaagacaaagatgattttaaagggcct
gaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaagcgtggagaa
gaaggactccatggaattgtgagctgtacagcctgtgggcagcaggtgaaccatttccaa
aaggattcaatctatagacaccctacactgaaagtgcttatttgtaagacttgctacaag
tattacatgagtgatgacatcagtcgtgattcagatgggatggatgaacagtgtaggtgg
tgtgctgaaggtggaaatttgatttgctgtgacttttgccataacgccttctgtaaaaag
tgcattttgcgcaacctgggccgaaaggagctctcgaccatcctggatgaaaatacccag
tggcactgctacgtttgtcatccagagcctttgttggacttggtcactgcgtgtgacagt
gtctttgaaaatttagaacagttgcttcaacaaaacaaaaaaaagataaaagttgaaaat
gaaaaaagtaaaacatgtgaccacacagtcaagttttctccaaagagaaataatgcaagt
tgtaatggggaagaaaaaaaattagataattcatattcaggttcactaacttattcttat
aaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaaactgattgaaactaca
acaaatctgaattctagctttgtaagctttttgaaaaacgctgcagaaaatgtagaaata
agcccaactatgcagctgtgccagttgaaagcttttaaatctgtgctgagtgacatgaaa
aaagctcatctgtcactagaagaaggcctgaacctagagattcaagcattgaatgttaaa
atcaaagataaaaataccaaagagaaaaaaactgaggttagatcagaaaaaaatgaggtg
aaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacgccacacagacacag
aaaaaagttgtgtcagagcagcctgacaatgagcccatggatcaaagtgttccctcagtg
gaacagacagataacaaggcagctcctggggaagagaaaaagtctgacagaaatgaagaa
ccgcagtatgagcccaacagtacagaggcattagacatggatatcgtgtccatcccctct
tctgttcctgaagatatttttgagactctggaatctactatggagattcagatgccatca
gatgagcaggacagtgcaaacacagcagcagagcatgagactctaaattcaaatacaaaa
gtgaatgctgctgtgaaagataccaaaggtggtaccaagttaaaatcgtcggctaaaggg
acaaaagaactgattgtaaaattgactccagtttctctgtcagagtccacacttaaagct
gaggagcaagacaacagcctagaaaaagacaatcaagacgttgatgcatctaaagacact
gatgcatctaaagacgttgatgaatctcaacctggggcagccagctgtgattctgtcaaa
caaaaccacagtgccagcagcgagccctccgcggagaacgacgctgtgcccgcggaggac
tcggatctccgcaggtcaccacgggtcaaaaccaccccactgaggcgtcccacggacatc
agccccctgacatccaactcagaagaggacagcaatgacacgagcaatgaaaaacagaag
aggaaagcgtccaagcaacccaggaagaaaaacgataaaagaaattcttctgacagcgct
gctgatggtcccagtcctaacaaactttccaaatccaaaaagccgtgtgacttagatcac
agctcagactctgatgagttgccagctgtccttaaagaagcggggaggatgaatcgcagc
tcctcagacagtgagagcaacagtgaaacaccagcgaaaaatcagaagaatttggatttt
ccaaagaatcaaccagtaaaggatgaaaatggaaaacgaaaaaggaaaagttccagttcc
ggttcagatttagatgccaaaagaggcaaatcagctaaaaatgctgctgctgccaaaaag
aaacgacaaaacgactctgattcttcaaattatgattctgagttggaaaaagagataaaa
atgctgagtaaaattgaggctgcaaaaaaatcgaagaaaaaatgcacacgaaaagatgat
agttatgattcctctgaagaagagcagaagaaaaaagtaagcagtaagagaaaggtaaat
ctgaagaagaggagaggtaaatcttctcaagatgatgatgctgagaagtcttctccagag
aaggaaattaatcactcttctaaagataaaaaactgggtaagaggtcagctgctaaggac
aaggcaaaagactcaaaagaaaattctgcaaagggaaaatgtgatgagtcttctgatgct
gagaagtcttcactggagaaagaggaaaatcctgaagttaagaaaaagagggatttgaaa
aagaaaaaggtgcaggatgattcttcttctgagagtactgaaaaatcggcaaagaaagag
cacaagtcggagtcttcaaaagacagattcaagaacaaaaaaggatcagaaagcaaagca
aagaaatctgaaaaactgaagaagaaagagcaagatgattcttcttctgatcttgataag
tcatctgcagagaaaggaagtagcaattcttctgagaacgacaaagttaaaaaggaaccc
gtgtttactgggaagaggaaattgagagagagagtagctgaaaaagtccacattgattta
tcctctgatactgagaaatctccccaaaaagaggagagctctgatgatgatgctgtgagg
cataaaaaacaaactgaaacgaaagaaaagaaaaaaataagccacaaaaagaaaatttcc
aagaaagagcagaatggctcatcctcttctgatgaggagtcttatgaagacactaagaaa
aagatgaaaagaggatcagtaaaagaaagtaaaaagagcaacttaaaaaagaaagtggca
aaaaagaagatggttgtgagttcctcatctgataaggaagaaaatgaagaagatgatcag
aactccacgggcgatggaagcagcgacgagcagaagatcaggccggtgaccgaaagcttg
atgctgtctgctgagggaggattttgtcagtcatcaggagatgagggagaggctctatca
aggactatcccaatggaggaggaggaagatgatgatgatgacgaccctgagaatagaatt
gccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatacgtct
tcagatgagcagccggagaaagggaaaaagaaacctgcaaagcaaactgaaaacacagga
gataatggagagaaggaaaaggaagacaagaagtctgaaaaggaagaaggtgattctgag
tcagattcagaggaagaagaaacgtccaagaagcccagatacagacacagactgctgagg
cagaagctcaccgtgagtgatggggagtctggagaagaaaaaaaggtggtgaagccaaaa
gacaaaaaagaaggggggaagcgcagaaatagaaggaaagtgagcagtgatgactcgaat
gactccgagttccaggagtctgcagtgagtgaagaggtcagtgagtctgaggatgaccaa
cggccaagaacaagatctgccaaaaaagccgaggctgaagaaaaccagcgcagctacaaa
cagaaaaagaaacgaaggaggataaaggttcaagaggattcatcaagtgaaaatgagaat
aagagtaaccctgagaatgaggacaatgatgactcaaaatctcctggaaaaggcaggaag
aaaatcaggaaaattattaaagatgataagcttagaacagaaacacaaaatgcacttaaa
gaagaagaagagagaagaaaacgtatagcagagagagaacgggagagagagaaattgaga
gaggtgatagagatcgaagatgcttcacctctgaaatgtcccattacaaccaagctggtt
ttagatgaagatgaagaaaccaaagaaccattagtgcaggttcacaggagtatagtgacc
agactgaagccacaccaagtagatggtgttcagttcatgtgggattgctgttgtgaatct
gtaaaaaaaaccaagacatctcctggctctggctgcattcttgctcactgtatgggcctg
gggaaaacattacaggtagtaagttttctccacacagtcttgctatgtgataaactggat
tttcggacagctctggtcgtgtgtccactcaacactgccttgaactggctgaatgagttt
gaaaaatggcaagaaggtttagaagatgaggaaaaactagaggtctatgagctggcaact
gtgaaaaggcctcaggagaggagctacatgctgcagcactggcaggatgagggaggtgtg
atgatcattggctacgagatgtatcggaacctggcacaaggcaggaatgtgaagagtagg
aaacttaaagaagtatttaataaagctttagtcgacccaggtcctgacttcgtggtgtgt
gatgaaggacacatattgaaaaatgaagcatctgctgtctctaaggcaatgaattctatt
agatctaggagaagaataattctgacaggaacaccactgcagaataatcttatagaatat
cactgcatggttaacttcattaaggagaatttgctcggctcaattaaggaattccggaat
cgattcatcaatcccatccagaacgggcagtgtgcagactccactctggtggatgtcagg
gtgatgaagaaacgtgctcacatcctctatgagatgttggctggctgtgttcagaggaag
gattacacagccttaaccaagttcctgccccccaaatacgagtacgtgctcgaggtgcgt
atgaccccgatccagtgcaagctgtaccagtattacctggatcatctgacaggtgtaggt
ggtggcaatgaaggtggaagaggcaaagctggagctaaactattccaggatttccagatg
ttgagcagaatctggactcacccttggtgtttgcagctggactatattagcaaagaaaat
aagggctattttgatgaagacagcatggatgacttcatagcttcagattctgatgaaact
tccatgagcttaagttctgatgattatgcaaagaaaaaaaagtccaaagggaaaaaggtg
aagaaagattgcagctcaagtggaagtggcagtgataatgatgttgaagtcattaaagtc
tggaattcaagatctcgtggaggtggggaaggaaatgtagaagatcttacaaacaaccct
gcatcaacaaagtcagatgaaggcaaagctacatcctcttccaatcctggcagcccatct
ccagactggtacaaagattttgtcactgatgcagacgctgaggtgttggaacattctggg
aaaatggtgctgctctttgaaattcttcgaatggcagaggaactgggagacaaagtccta
gtgttcagccagtccctaatatctctggatttgatagaagatttcctggagctggctaac
agggagaaatctgacaaagataagcctccgatctacaaaggtgaaggcaaatggttcagg
aatattgattattatcgcttggatggctcaaccacagctcagtccaggaagaaatgggct
gaggagtttaatgatgaaacgaatgtgagaggccgcttgtttatcatctccactaaagca
ggttccctgggaataaacctggtggctgctaacagagtcatcatctttgatgcctcttgg
aacccctcctatgacatccagagcatcttcagggtttatcgctttgggcagaacaagcct
gtgtttgtgtacaggtttttggctcagggaaccatggaggacaagatctacgaccggcag
gtgacgaagcagtcgctgtccttcagggtggtggaccagcagcaggtggagaggcacttc
accatgaacgagctcactgagctctacacctttgagccagacctgctggacgaccccaac
tctgagaagaagaagaagagggacacccccatgctgccaaaagactcgatcctggcagag
ctgctgcagatcaacaaggagtacatcgtgggctaccacgaacatgattccctcctggac
cacaaggaggaagaggaactcactgaagaagagaggaaggcagcctgggcagaatatgaa
gcagaaaagaagggcatcaccatgcgtttcaacatgccaacagggaccaccaccatgccc
ccaaatttcaactcccagacatatattccttacaatttgggtgctctgtcagcaatgagt
aaccaacagctggaggacctcattaatcaaggaagagagaaggtggtggaagcagccaac
agtgtggctgcagcaagaatccagccccttgaagacatcatttcagccgtatggaaagaa
aacttaaccctgacagagagccaggtgcaggccctggccctgaacagacaggcgagccag
gagctggacgtgaagcgccgagaagccatttacaacgacgtcctcgggaaacagcagatg
ttgatcagttgtgtccagaggatcctgatgaacaggcggctccagcagcagtacaaccag
cagcagcagcagcagatgtcctaccagcaagcagccatgggccacctcatgatgccaaag
cctccaaatttaatcatgaatccttccaactacacagccatagatgtgagaggaatgtat
cagtcagtgtctggtgggatgcagccaccacccctacaacgagcaccacccccaatgaga
ggcaaaagtccagggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
