Sylvia atricapilla (blackcap): 136370526
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Entry
136370526 CDS
T10263
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
sati04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136370526 (BRCC3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
136370526 (BRCC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sati01002
]
136370526 (BRCC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136370526 (BRCC3)
03036 Chromosome and associated proteins [BR:
sati03036
]
136370526 (BRCC3)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136370526 (BRCC3)
Peptidases and inhibitors [BR:
sati01002
]
Metallo peptidases
Family M67
136370526 (BRCC3)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
136370526 (BRCC3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
136370526 (BRCC3)
BRISC complex
136370526 (BRCC3)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
136370526 (BRCC3)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
136370526 (BRCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
136370526
NCBI-ProteinID:
XP_066190069
LinkDB
All DBs
Position
21:3870253..3875267
Genome browser
AA seq
261 aa
AA seq
DB search
MAVQAVHLEADAFLVCLNHALSTEKEEVMGLCIGEVDTSRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHETIGKVCLESAVEL
PKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QRVQELQQEKEQLLEELAALE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggcggtgcacctggaggcggacgcgttcttggtgtgcctgaaccacgcg
ctgagcaccgagaaggaggaggtcatggggctctgcatcggagaggttgacaccagccga
atcgtccacatccactctgtgataatcctgcgccgctcggacaagcggaaagaccgagtg
gagatctcaccagagcagctttcagctgcctccactgaagcagagaggttggctgagatc
acaggacgtcccatgagggtggtgggctggtaccactcccacccccacatcactgtgtgg
ccctcacacgtcgatgtccgcacacaggccatgtaccagatgatggaccaagggtttgta
gggctgatcttttcctgcttcattgaggacaagaacaccaagacaggcagaattctctat
acctgtttccagtctattcaggcccagaagagttcagaatatgaaaggattgaaattccc
attcatgttgtcccccatgaaaccattgggaaagtgtgtctggaatcagctgtggagctg
cccaagatcctttgccaagaagagcaggatgcctacaggagaattcacagcctcacacac
cttgactctgtaaccaagatccataatggctcagtgttcacaaagaatctctgcagccaa
atgtctgccatcagtgggcccttgctgcagtggctggaggacagactggaacagaacaaa
cagcgtgtgcaggagctgcagcaggagaaagagcagctgctggaggaacttgctgcttta
gagtga
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