Sylvia atricapilla (blackcap): 136370582
Help
Entry
136370582 CDS
T10263
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136370582 (FMR1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136370582 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
136370582 (FMR1)
mRNA cycle factors
Stress granule specific factors
136370582 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_NusA_2nd
KH_2
KH-I_KHDC4-BBP
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
136370582
NCBI-ProteinID:
XP_066190171
LinkDB
All DBs
Position
21:complement(5964282..5993483)
Genome browser
AA seq
565 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGSTRGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGFVPVRVDCSNERSVHTKTFQNTSSEGSRLRA
GKERNPKKEKTESADTQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacatcaat
gaaagcgatgaagtagaggtttattccagggcaaacgagaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatccgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagttcctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttgtcaatcaatgatgtgaccacgaagagg
gccaacatgctgattgatatgcactttcggagtcttcgcaccaagttatccctgatactg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgtagtacgtgaagatctaatgggtttggccattggcactcatggggccaat
attcagcaagccaggaaagtccctggagtgactgccattgatcttgatgaagatacttgt
acattccatatttatggggaggatcaagatgctgtgaaaaaggcaagaagttaccttgaa
tttgctgaagatgtcatccaagtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaagaaatagtggacaaatctggtgttgtaagagtgagaattgaggcc
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcaaattgacgagcaactgcgacagatcggagcg
acttccaggcccccgccgaaccgcacggacaaggacaaagggtacatgacagacgacggg
ccgggcctgggccgcggcagccgcccctaccggaaccgcggccacagccgccgtgggccg
ggctacgcttcaggaactaattctgaagcatcaaatgcttctgaaacagagtctgaccac
agagacgagctgagcgattggtcggcggcgccggcggaggaggagcgggacaattacctg
cgccggggggacgggcggcggcgcggcggcagcacccggggccagggcggccggggccgc
gggggattcaaaggcaacgatgaacagtcgcgaacagacaaccgtcagcgcaactcgaga
gaggcaaaagggaggacagcagacgggtttgttccagtgagagttgactgcagtaatgag
aggagtgtccacactaaaacctttcagaatacctcgagcgaaggcagccggctgcgcgcg
ggcaaggagcggaaccccaagaaggagaagacggagagcgcggacacccaacagccgctg
gtcaacggagtcccctaa
DBGET
integrated database retrieval system
