Sylvia atricapilla (blackcap): 136370707
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Entry
136370707 CDS
T10263
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
sati Sylvia atricapilla (blackcap)
Brite
Cilium and associated proteins [BR:
sati03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
136370707 (NPHP4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136370707
NCBI-ProteinID:
XP_066190334
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Position
22:complement(3393393..3413037)
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AA seq
1336 aa
AA seq
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MGEWDRVFRQHLALPPHPQRGRARPPPRSTAFRCVLKYLHGAALSQGAEYQLRLSLFDAT
YHHFFGRTWRSSWRAAGAAPLRSARATFNEVVYFHTSLNHPSIAAVVEVVMTAGKKDEGS
QHLSCGFGIIPLFRGGSEVTDPATEDRALKLYHGTPRALLHPRFQNPVEKNKYMTVMEKS
HLQYALKSHPPLEAIFHLLPENLLISGMQTVPGVLPAHGDTGDCLQKPRLMKTVTCYLER
LFIRLYPSLEEFEEELLDLLNSDRLLQANTAPDGEELVVRERRLHVGVHNGLRFVRAPQV
AVLVPDMELSPGGCQEVPSSGARDASQGLVLRSRIQLSEMVPHPAFRVCFQLEYVFCSAG
RAGGKALPGSARREAADMRSVRWAVWNPVLGTGDTDVVLPLRGGACRGPCQALVYRAPPS
SRQGKHVESGTVQFHVSTDSEEHLVTAAEILCKDRDESKQPPTPSLRVPTPRRVPVSPQG
PRLSVSQLVASPQGTGQTLQQDGGITHLEADLGSPDAEPCASDQLRALPFTPLQLPMAAV
GLQACSSHVSLSRAALARLHAAGFPDILDCNQEPVEISEPVELGTFNLRLEEADPLQGNE
IVLQFLAFGSDAQGSVEGRQPRTVFLTFQFYRFPPVTTPRLQLVSTDRGLATGLAVPAQL
LVRVNEDGTLTRPPGLQLKYMVDPAFLRPGEHLWFLRYLAEHSLQIDVWDGDSLLHVGSA
AIKLEPLLRQGQMAVRTYHELEVATTEYEPDGMVMGREALRHGALRPLGVRVAVRGHLHL
CLANVGHPCEETPEQLASHSRIVTAPDSTVTTPGGSRRSLNAAGGGRTTWARRLVDVDNE
LEATLRNRRPEGWPKQRAWDLQVIDAYRDHIKGESIYQMLSQAITATRTVHAVLGTAEFF
EFALKNPYGVQHTVTIEVDHPELSVILDPREWRHFKELTKSVTPVEEDMFHLRDDLKPQV
YLRPSETVHIPFKYQTFSADPAVVAAQGPAGLSTGARESPHSLGKSGAKQAKLIQVSFQV
SGGKPIAFLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGTPVGMPGGQPEM
FVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSPQIKKFFVAIYTDAWLAAPVQIWQFYL
HSLQRLDVACTAGQLTRLSLLLRGTAAPRRVQAFTSHPQELEVDPKGAFLLPANGIQDLY
IGVRPRRAGSKFIYLNLVDVEFHQLVSSWLLCLSCRQPLISKAFEISLPAGGGKGCNKRI
TYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQTVGEEEILIHIND
HEDKNEETFCVKVLYQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtgggaccgggtgttccggcagcacctggcgctgccgccgcacccgcagcgg
ggccgggcccggcccccgccccgctccaccgccttccgctgcgtcctcaagtacctgcac
ggcgctgccctctcccagggagcagaataccagctgcgcctctcccttttcgatgccacc
taccaccacttctttgggaggacgtggaggagcagctggcgagctgctggtgctgcccca
ctgcgctcggccagggcaaccttcaatgaggttgtttatttccacacctccttgaaccac
cctagcattgctgctgtcgtagaagtggtaatgacggctgggaaaaaggatgagggctct
cagcatctttcctgtggctttggaatcatccccctcttccgtggtggatcagaggtgaca
gacccagccactgaggacagagcgctgaagctgtaccatgggacaccacgtgccctactg
cacccacgcttccagaaccctgtggaaaagaacaaatacatgacagtgatggagaagagc
cacctgcagtatgccctgaagtcccacccacccctggaggcaatatttcaccttcttcct
gaaaacctgctgatatctgggatgcagactgttcctggtgtgctgccagcacatggagac
acaggtgactgcttgcagaagccccggctgatgaagacagtcacctgctatctggagagg
cttttcatccggttgtacccttccctggaggagtttgaggaggaactgctggatttattg
aacagtgatcgtttgctccaggctaacactgctccggatggtgaagagctggtggttcgg
gagcggcggctgcacgttggtgtccacaatggcctgcgcttcgtccgggctccgcaggtc
gccgtgctggtgccagacatggaattgtcaccaggtggctgccaggaggtgcctagctct
ggagccagggatgcaagtcaaggcctagtgctgaggagccgcatccagctgagcgaaatg
gtccctcacccggcattcagggtctgcttccagctggaatatgtcttctgcagcgcggga
agagctggtgggaaggctctgcccggcagtgcccgccgggaggcggccgacatgcgctcg
gtgcgctgggctgtctggaaccctgtcctgggcaccggtgacacggacgtggtcctgccc
ctgcgtggtggtgcctgccgtggcccctgccaagccttggtctaccgggccccaccgagc
tcccggcaggggaagcacgtggagtctgggactgtccaattccatgtttccactgattcg
gaagaacatcttgtaactgctgcggagatcctatgtaaagacagggacgagtcgaagcag
cctcctacgccatcgctgagagtgccaaccccacggcgagtgccagtctccccacaggga
ccaaggctgtcagtgtcccagcttgtggcctcaccacagggcacaggccagaccctgcag
caggatgggggcatcacccacctggaggccgacctgggctcaccagatgcagagccctgt
gccagtgaccagctgcgggcgctgcccttcaccccactgcagctgcccatggctgctgtg
gggctgcaggcatgcagttcccacgtgtccctctctcgtgctgcgctggcacgcctgcac
gctgccggctttccagacatcctggactgcaaccaggagccagtggaaatctcagagcca
gtggagctgggcactttcaacctgcggctggaggaagctgaccctctgcaaggcaatgaa
atagtcctgcagttcctggcttttggcagtgatgctcagggcagtgtggaagggcggcag
ccgaggactgtcttcctcaccttccagttctaccgtttcccaccggtcaccacgccccgg
ctgcagctggtcagcacagacagggggctggcaacggggctggctgtgccagcacagctc
cttgtccgtgtcaacgaggatgggaccctaaccagaccaccaggcttgcagctgaagtac
atggtggatccagctttcctgcggcctggagagcacctctggttcctgcggtacctggct
gagcacagcctccagattgacgtctgggatggagactccctgctccatgttgggtctgct
gccattaaactggagcccctgctgcgtcagggccagatggctgtcaggacctaccacgag
ctggaggtggccacgactgagtacgagccagatgggatggtgatgggccgggaggctctg
cggcacggcgccctgcggcccctcggtgtccgtgtggctgtgaggggccacctccacctc
tgcctggccaatgttggtcacccgtgtgaggagaccccagagcagctggcatcccactcc
cgcattgtcactgcaccagacagcactgtcaccaccccaggtggcagccgacgctccctg
aatgctgctggtggtgggaggacgacgtgggcacggaggctggtggatgtggacaatgag
ctggaggccacactgcgcaatcgccggccagaaggctggccaaagcaacgtgcctgggac
ctgcaggtcattgatgcctatcgggatcacatcaagggagagagcatctaccagatgctc
agccaggccatcacagccacccgcactgtccatgctgtgctggggacagctgagttcttt
gagtttgccctgaagaacccttatggtgtccagcacactgtgaccatcgaggttgaccac
cctgagctcagtgtcatactggacccgagggagtggcgccacttcaaggagctgaccaag
agtgttacaccagtggaggaggatatgttccatctccgtgatgacctcaagccacaggtc
tacctgcgtcccagtgagactgtccacatccccttcaagtaccagaccttctctgcagac
cctgccgtggttgcagcgcaggggccggctgggctgagcacaggtgccagggagagccct
cactcccttgggaagagcggggccaagcaggcaaagctcatccaggtctccttccaggtg
agcggggggaagcccattgcattcctgcgggtgaaggtggaaccacagccccatgtggtg
gaccagaccttccgcttctaccacccagagctcaccttcctgaagaaaaccattcggctg
cctccttggcacaccctccctggcacaccagtggggatgccaggtgggcagcctgagatg
ttcgttcgctgcagtgaccctgacatcatttgtgaaaccaaatccttggggcctggtgag
ccacaggacatcttcctcaaagtagccggaggaccaagcccgcagatcaaaaagttcttt
gttgctatttatacggacgcctggctggcagcacctgtccagatctggcagttctacctg
cactcgctgcagcgcctggacgtcgcctgcacggctgggcagctcacccgcctctccctg
ctgctgcgtggcactgcagccccacggagggtgcaggccttcacctcccacccccaggag
ctggaggtggatccaaagggtgccttcctcctccctgccaatggcattcaggacctgtac
atcggcgtgaggccacggcgggctggcagcaagttcatctacctcaacctggtggatgtg
gagttccaccagctggtgtcctcctggctgctctgcctgtcctgcaggcagcctctcatc
tccaaggcctttgagatctcgctgcctgcaggaggtgggaaaggctgcaacaagcgcatc
acctacaccaacccctacccctcgccccggctctacttcttatgcaccaaccgccccgac
ctgctgcagtttaaggaggactccttcgaggtggctggaggggaggtgtacaccatcggc
ctgcgctttgccccgagccagactgtgggggaggaggagatcctgatccacatcaatgac
cacgaggacaagaacgaggagaccttctgtgtgaaggtcctgtaccagtga
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