Sylvia atricapilla (blackcap): 136370771
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Entry
136370771 CDS
T10263
Symbol
EXOSC10
Name
(RefSeq) exosome complex component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
136370771 (EXOSC10)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136370771
NCBI-ProteinID:
XP_066190455
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Position
22:5010911..5025312
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AA seq
897 aa
AA seq
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MAAAAREGSPAGRAGGSGAPADTEGSSTMSALPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCSTQGDRLLRCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDAILERVSILLDEASGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRAQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDGVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLEHLLKLYCDVDA
DKKYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVRELLWERGKEQPTQLQVVWQRSRD
ICLKRYIKPLFTDESYLDLYRRQKRHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKEPQGIIACCNPVPPLIRQQINELHLLIQQAREMPLVKSEITSAAKKRAP
LSSPEKLENALFGPHDSSRIPMNDFQNNSALDPAPVLEDVCLFSDSESMMDIQDNQPEST
CLVATTTVSIFSECDGNEENKTLTAAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAKF
DPSSKIYEISNRWKLVSQAPVQKKSKNETSKKAVQQPAAHVQTQNLNKKAEENVVSLRQQ
AMQEQANRKRERDTSEMGAETGAELPTREKKRQKTPQKPEELEAPKQFTPFDYSNSNFKV
FAGSSKSKQSQQFDPAKQAHTGKKFAGANKLQQSGNRSMSYLAGKAERGSTHHWPKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcccgtgaggggagcccggcgggccgggcgggcggctccggggcaccc
gcggacaccgagggaagcagcacgatgtcggccctgcccgggttcgacagccccgacgcc
ttcgtcaagtacgctcttggcacagtggtggctgcaacaaaggcatccaatggtctcccc
cagcctggagatgagtatgatttctactgcagcttccccgggttccgtgcatactgcagc
acacagggagaccgcctgctccgctgcatgagccaggtgatgcagtaccatggctgccgg
agcctcatgaaagattccagcaaagtgacaggactggaagataaatttgatatgctggtt
gactccaatgatgctattcttgaaagagtgagtattttattggatgaggcctcaggagtg
aatagaaaccagcagccagtcctgccagctgggttgcagcccccacagatgatcgtttcc
agctggaaccgcaaggcaggagaattccacaagagagctcagtctgaaacattccgactg
cttcatgccaagaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaactttttatcaaacccaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactggagcatttttctccaccagatggagttctcaagaaacct
gagctccagatgtacaggcccattgaggaaacaccctgtcattttatcaccacactggat
gagttggtagaactaaatgaaaaacttatgacttgtaaagaatttgccttggacttggag
caccactcctacaggagcttccttggcttgacgtgtctgatgcagatttccacccgaaca
gaagatttcattattgatacactggaactgcgcagtgacatgtacatcctcaacgagacc
ttcacagaccctgcaattgtgaaggtcctgcatggtgctgattcagatgtggaatggctg
caaagagactttggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattctttggaacacttgctaaagctgtattgtgatgtagatgct
gacaagaagtaccagctggctgactggaggatacgccctttgccagaagaaatgatccag
tacgcccgtgatgacactcactacttgctctacatctatgacaaagtgagggagttgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagagatacatcaagcccctctttacagatgaatcctaccttgatctctac
cggaggcagaagaggcaccttgacacccagcagctggcagcattcaggctgctgtttgca
tggagagacaagattgcacgtcaagaggacgagagcacaggatatgtgctaccaaatcat
atgctgttgaagattgcagaggagctgcccaaagaaccccagggtatcattgcctgctgt
aaccctgtcccaccacttattcgccagcagattaatgaattgcatctgctcattcagcag
gcccgggagatgcctcttgtcaagtcagaaattacttcagcagccaagaagagagcacct
ctatccagccctgagaagctggagaatgccctctttggaccacatgacagttcacggatt
cctatgaatgattttcagaataactctgccttggaccctgcaccagttttggaagatgtt
tgtctcttttcagacagtgagagcatgatggatattcaagacaatcagccagagtcaaca
tgtcttgttgctactaccactgtcagcatattcagtgaatgcgatggaaacgaagaaaat
aagactttaacggctgcacagcggaaagctcagctaataatggagtcctttgaaaatcca
tttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaagttt
gacccatcatcaaaaatatatgaaatcagcaatcgatggaagttggtgagtcaggcacca
gtacagaagaagtccaagaatgaaaccagtaagaaagcagtccagcagccagctgcccat
gtccagacgcagaatttgaataaaaaggcagaagaaaatgtcgtatctcttcgtcagcaa
gccatgcaggaacaagctaataggaagagggaaagagacacaagtgaaatgggagcagaa
acaggagcagagttgccaacacgagaaaagaaacggcagaaaaccccccagaaaccagag
gagctggaagcaccgaagcagtttaccccctttgattacagcaattccaacttcaaagtg
tttgcaggaagcagcaaatcaaaacagtcacagcaatttgatcctgccaagcaagctcac
acaggcaagaaatttgctggagctaacaaacttcaacagtctggaaaccggagcatgtcc
tacctggcagggaaagctgaaaggggttccacacaccactggccaaagagataa
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