Sylvia atricapilla (blackcap): 136370826
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Entry
136370826 CDS
T10263
Symbol
FBXO42
Name
(RefSeq) F-box only protein 42 isoform X1
KO
K10317
F-box protein 42
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136370826 (FBXO42)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136370826 (FBXO42)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
136370826
NCBI-ProteinID:
XP_066190542
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All DBs
Position
22:6758121..6803331
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AA seq
707 aa
AA seq
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MASSSDSDDDGFMAVDPEDAVVEGTMEQEDEPHAELEVEESRPSSRSMLELPEEVLEYIL
SFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQR
FSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATL
VVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIMTTHGPPPMAGHSSCV
IKDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPSISGPSPHPRGGQSQIVIDNETILIL
GGCGGPNALFKDAWLLHMQANPWTWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPS
GRAPLSPSLNSRPSPISATPPALVPETREFRSQSPVRNTDEAPCVNGRWGTLRPRRQTPS
GSREGSLSPARGDSSPVLNGGTVSPGAALVGGASLDSPVQALSPSTPSATEGFDLKVGPA
LAPRRGSLPEQRDLRLASMELGWEQKPTSLLCQLDGAEGRTAGTRNPPEHTNGIHTPPHA
TGALPGAVSPGALRRSLEAVKALSSKASSASAALSPPLASSPGSPGTEPGSARLGAAQGE
GHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEQGRVKWKVFNSSSV
VGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcctcagacagtgacgatgatgggttcatggccgtggatccagaggatgcc
gtggtggaagggacgatggagcaggaggatgagccccacgccgagctggaggtggaggag
tccaggcccagctccagatcgatgctggagctgccagaagaggttttggagtacatcctg
tccttcctctctccctaccaggagcacaaaaccgctgcccttgtctgcaaacagtggtat
cgactgatcaaaggtgtggcccatcagtgctaccacggctttatcaaggcagtgcaggaa
gggaacatccagtgggagagccgcacttacccctaccccggcacccccatcacccagcgc
ttctcccacagtgcgtgttactacgatgccaaccagtccatgtacgtgttcgggggctgc
acccagagcagctgcaacgccgccttcaacgacctctggagactggacctcaacagcaag
gagtggatccggcccctggcctcaggttcctacccctctcccaaggctggggccacgctg
gtggtctacaaggacttgctggtgctttttggggggtggacccggccgagcccttacccc
ctgcaccagcccgagaggttcttcgatgagatccacacgtactccccctccaaaaactgg
tggaactgcatcatgaccacacacggcccccctcccatggcaggacactcctcctgtgtc
atcaaagacaaaatgatcgtttttgggggctcccttggatcccgacagatgagcaacgac
gtctgggtgctggatctggagcagtgggcttggtccaagcccagcatctctgggcccagc
cctcacccacgcgggggccagtcccagattgtgatagacaatgagaccattttaatcctc
ggaggctgcgggggccccaatgcactgttcaaagacgcctggttgctgcacatgcaggcc
aacccctggacgtggcagccgctcaaggtggagaacgaggaccatggagccccggagctg
tggtgccatcccgcgtgcagggtgggacagtgcgttgtggtcttcagccaagctcctagt
gggagagccccactgagccccagcctcaactcccgcccgtctcccatcagcgccacgcca
cccgccctggtgcctgagacacgggaattccgctcccagtctcctgtcaggaacacggac
gaggctccctgcgtcaacggccgttggggcaccctgcggccccgcaggcagacgccgtcg
ggctcgcgggagggcagcctgtcccctgccagaggggacagttccccggtgctcaacggc
ggcactgtgtcacctggagcagcactggtcggtggagcctccctggacagccctgtgcag
gccctgtcccccagcaccccctcagccaccgagggattcgacctcaaggtggggccagcc
ctggcaccgcgccgcggctcactgccggagcagagggatctgcgcctggcctccatggag
ctgggctgggagcagaagcccacgtccctcctgtgccagctggacggcgcggagggcagg
acagcaggcacgcggaaccccccggagcacaccaacggcatccacaccccgccccacgcc
accggtgccctgcccggagccgtgtcccccggcgcgctccgccgcagcctcgaggccgtc
aaagccctgtcctccaaagcctcctcggcctcggccgcgctgagccctcccctggcatca
tccccagggtccccgggcaccgagccgggctcagcacggctgggcgctgcccagggcgag
gggcactcgctgccccccatcgcccggcgcctcgggcaccacccaccgcagtcgctgaat
gtgggcaagccgctgtaccagagcatgaactgcaagcccatgcagatgtacgtgctggac
attaaggacaccaaggagcagggacgagtcaaatggaaagtgttcaacagcagctctgtg
gtggggccacctgagaccagtttacacacagtggtgcaaggccgaggggagctgatcata
ttcggtggcctcatggacaagaaacaaaatgtcaaatattaccccaaaacaaatgccttg
tactttgtgcgagcaaagagataa
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