Sylvia atricapilla (blackcap): 136370895
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Entry
136370895 CDS
T10263
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04120
Ubiquitin mediated proteolysis
sati04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136370895 (UBE4B)
04120 Ubiquitin mediated proteolysis
136370895 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136370895 (UBE4B)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136370895 (UBE4B)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
U-box type E3
136370895 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
136370895
NCBI-ProteinID:
XP_066190680
LinkDB
All DBs
Position
22:683126..717529
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AA seq
1335 aa
AA seq
DB search
MEELSADEANSFTALSVSPQTVSLRSLSPQTVSPRSLSPQIRRRRLARLAGGSSSQPSTP
LTSPQRETPPGTAPAPGPSHSLGLNVHSMTPATSPIGASGVAHRSQSSEGVSSLSSSPSN
SLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIENMEVDENDRREKRSLTDKEPLSGS
EVSEEQALQLVCKIFRVSWKDRDRDVIFLNSLSAQFKQNPKEVFSDFKDLIGQILMEVLM
MSTQARDENPFASLTATSQPIAAAARSPDRSLILNMGSNPGSSPMFCNVGSFGSSSLSSL
YGTSPAPPTNFTSYVPMTGSSLTPPASSVPPISGSPWCSQPCSPRYRPYTVTHPSAAPRC
PSLPLPAPAAGPAAAAAGPAALPAVATGPAALPALPALPALPAQRWPTALPLLGAAPGAR
RGRPSFQSSIPPSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPK
MCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELV
RTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLV
VSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVS
QSLQHYLELARQELFKILHSILLNGDTREAALGYMAAVVNANMKKAQMQTDDRLVSTDGF
MLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWTAELYRDQS
LFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLA
TRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIK
LPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIR
NPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEF
YDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLK
RIHEVQEEMKNKEQWDLLPREQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK
PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR
FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYS
DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPEL
KEQIQAWMRDKQNEH
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgaggcgaacagtttcaccgcgctctctgtgtccccgcag
acagtttcactgcgctctctgtccccgcagacagtttcaccgcgctctctgtccccgcag
atccgccggaggcgcctggcacggctggcagggggctcctcgtcgcagcccagcaccccg
ctgacgtccccgcagagagagacgcccccgggcacggccccagcgccggggccctcgcac
agcctgggcctcaacgtgcacagcatgaccccagctacctctcccatcggggcatcagga
gtagcccaccgaagccagagcagcgaaggagtgagttccctcagcagttctccatcaaac
agccttgaaacccaatctcagtccctctctcggtctcagagcatggacattgatagtgtc
tcctgtgagaaaagcatgtcccaggtagatgtggactcaggaattgagaacatggaggtg
gatgagaacgatcgcagggagaaaaggagcctcacagacaaggaaccactgtcggggtca
gaagtgtcagaggaacaagctctacagctggtctgtaagatcttcagagtctcctggaag
gaccgagacagagatgttattttcctgaattcactctctgcccagttcaagcagaaccca
aaggaagtgttttcagattttaaggacttgattgggcagattctgatggaagtgctgatg
atgtccacccaggcgagggacgagaacccctttgccagcctgacagccacctcccagccc
attgctgcagccgcccgctcccctgacagaagcctcatcctaaacatgggctccaaccct
ggaagcagccccatgttctgtaacgtgggctcctttggttccagctcgttatccagtctc
tatgggactagtccagctcctcctaccaatttcacaagctatgtaccaatgactggttca
tctcttaccccaccagccagttcagtgcctcccatttctggcagcccctggtgctcccag
ccgtgctctcctcgctaccgcccctacaccgtgacccatccctcggcggcgcctcgctgc
ccgagcctccccctgccagcccctgctgctggccctgcggccgctgctgctggccctgcg
gccctgccagccgtggctactggccctgcagccctgccagccctgccagccctgccagcc
ctgccagcccagcgctggcccacggctctgcctctgctcggcgctgcgcccggcgcccgg
cgcgggcggccctccttccagagcagcatccctcctagcgtgggaggctctggcagctcg
agtgtttccgattcctgcagtgaccacttcaccattgagaactgtaaggagacagagatg
ctgaactacctcatcgagtgttttgacagggttggaatagaggagagaaaagcaccaaag
atgtgtagccagccaacagtgagccagttactgagcaacatccgatcccagtgcatttcc
cacgctgctttggtgctacagggatccttaacacaaccaaggtcgttgcagcagcagtct
ttgctggtaccatatatgctgtgtaggaatctcccatttggcttcattcaagagttggtg
agaacaacttaccaggatgaagaggtgttcaaacagatctttattcccatcttacaaggc
ctggctgtggcttccaaagagtgctccctcgatagtgacaattttaaatatccccttatg
gcactatgtgaactctgtgaaatcaagtttgggaaaacacaccccatgtgcagtttggtc
gtctctttgcccttgtggttgcccaaatctttaagcacaggtgcaggaagagaactgcaa
agactttcctaccttggagccttcttcagtctctctgtctttgctgaggatgataacaaa
gtagttgaaaagtacttctcagggcctgccattactcttgagaacacccgggttgttagc
cagtctctgcaacattacctggaattagcaaggcaagagctgttcaagatcctgcacagc
atcctgctgaacggggacacgcgggaggcagctctgggctacatggcagctgtggtcaat
gccaacatgaagaaggctcagatgcagacagacgatcgcctggtgtctacagatggcttc
atgctcaacttcctctgggtgctgcagcagctgagcacgaagataaagctggaaacggtt
gatcccatgtacatattccatcccaggtgtcggatcgagctgcccacagatgagactaga
gtgaaggcaacaatggaggaggttgcagcctggactgctgaactttacagggaccagtct
ctgttttctgagcccaagttcccgacggagtgtttcttcctgacgctgcacgcccaccac
ctgtccatcctgcccagctgccgccgctacatccgcaggctgcgtgccatcagggagctc
aacaggactgttgaagatctgaaaaacaatgaaagtcagtggaaggattctcctctggcc
accaggcatcgagagatgctgaaacggtgcaagacacagcttaagaaactggtgaggtgc
aaggcttgtgcagacgctggtttgctggatgaaaacttcctcaggaggtgcctgaatttc
tatggcatggtgattcagctgatgcttcgcatccttgaccctgcctatcccaacataaaa
ttgcctttaactcctgaggttccgaaagtatttgcatcgttgccggagttttacgtggaa
gatgttgctgaatttttattttttattgtacaatatgctcctcaggtgctgtatgagccc
tgcactcaggacatagtgatgttccttgttgtgatgctgtgcaaccagaactacatccga
aatccttatttagtagccaagctggtggaagtgatgttcatgacaaatccagctgttcag
ccccggacacagaagttctttgaaatgattgagaatcaccctctctccactaaattgtta
gtcccctccttgatgaagttttacacagatgtggagcacaccggagccacgagcgagttc
tatgacaagtttacaatccgctaccacatcagcaccattttcaaaagcctctggcagaac
atagctcaccatggtacatttatggaggagttcaactctgggaagcagtttgttcgctac
atcaacatgctgataaatgacacgactttcttgctggatgagagtctggagtccctaaaa
cgtatccatgaagtgcaagaggagatgaagaataaagagcaatgggacctgctgcccagg
gagcagcagcaggcccggcagtcgcagctggctcaggacgagcgcgtgtcccgttcctac
cttgccctggcaacagaaactgttgatatgttccatatcctgaccaagcaggtccaaaag
cctttcctcagacctgaacttggaccacggctggctgctatgctgaactttaacctccag
cagctgtgtggccccaagtgccgtgacctgaaagttgaaaacccagagaaatacgggttt
gaaccaaagaagctgttggaccaactgactgacatttatctgcagctggattgtgctcgc
tttgctaaagcaattgctgatgatcagaggtcctacagtaaggagctctttgaggaggtt
atctccaagatgaggaaggctggaatcaagtcgaccatagcaatagagaaattcaaactg
ctggcagagaaggtggaggaaattgttgccaagaatgcccgtgcagagattgattacagc
gatgctccagatgaattcagagatcctctgatggacaccctgatgacagaccccgtgagg
ctgccctcaggaaccatcatggacaggtccatcatcctgaggcacctgctcaactcctcc
actgaccccttcaaccgtcagacgctgacagaaaatatgctggaaccagtgccagaactt
aaagagcaaatccaagcctggatgagagacaagcagaatgagcattaa
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