Sylvia atricapilla (blackcap): 136370927
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Entry
136370927 CDS
T10263
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136370927 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136370927 (CRTAM)
04090 CD molecules [BR:
sati04090
]
136370927 (CRTAM)
Cell adhesion molecules [BR:
sati04515
]
Immunoglobulin superfamily
Nectin family
136370927 (CRTAM)
CD molecules [BR:
sati04090
]
Proteins
136370927 (CRTAM)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
Ig_2
ig
C2-set_3
C2-set_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
136370927
NCBI-ProteinID:
XP_066190723
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Position
23:complement(3937067..3950285)
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AA seq
563 aa
AA seq
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MTVPAVLLAVPLLLLPGGFPGAASDTVTLKEGENLNLHCTFSTLSNGDSSALQWLNPRGF
TIFFNAEQVLKDQRYKLLRYSKDELSIQLSNVTVQDAGIYSCLSYSSHFQNKTQNVEILA
APSQPVLEVSQDSGRGIKLSCHTQGCKPLPQISWLLDNGMELQGDTRHQLGADGWKWSTS
STLRILSYSPKVTASCIILHPALGGQRLVASLPFQDLPSTGCKQPSSPSEEAEAPSPSES
PSVPSSPENPEVSKSSASPENPQSPQVSKPSASPESPQVSKPSPSPENPQVSKPSPSPEN
PDVSKPSPSPENPEVSKPSPSPENPQVSSPSASPNDTGVPSPASPEAPAAPSSAPARPNP
ADVTSDGTEETTAAADLGGSSTSGGFNGAGAAPSGNGTEEEPPRTEVPPGCENRTGISIP
TLEQNPDSKGRLRKERNLLLPILVAALIFVLLIIVLLFMAKLKKAHGVWKRENDVSEQTL
ESYKSRSNEDSPGHEKNGQAANPKSNVQYVTEDHVETPEKNLETPEKNLETPEKNLEPPG
KNPGDKNLAISEKIFECGRETDV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccccgccgtgctgctcgccgtgcccctgctcctgctgccaggggggtttcca
ggggctgccagtgacacggtgactctgaaggaaggagaaaacctaaatcttcactgcacc
ttcagcaccctcagcaacggcgacagctctgccctgcagtggttaaaccctcggggtttc
accattttcttcaacgctgagcaggttttaaaagaccagaggtacaaactcctccgttac
tccaaggatgaactgtccatccagctgtccaacgtgacagtgcaggacgcaggaatttac
agctgcctctcctacagcagccacttccaaaacaagacccagaatgtggagattttggct
gctccttcccagccagtgctggaggtatcccaggactcaggaaggggcatcaaactctcc
tgccacacccaggggtgcaaacccctgccccagatctcctggctcttggacaacgggatg
gagctccaaggtgacaccaggcaccagctgggagctgatgggtggaaatggagcacgagc
agcaccctgaggatcctcagctacagccccaaagtgacagccagctgcatcatcctgcac
cctgcgctcgggggacagaggctggtggcatctttgcccttccaggacctgcccagcaca
ggctgcaaacaaccgagcagcccttcagaggaggcagaagctcccagcccttcagagagt
ccatcagttcccagttctccagagaatccagaagtttccaaatcttctgcatccccagag
aatccacaaagtccacaagtttccaaaccttctgcatccccagagagtccacaagtttcc
aaaccttctccatccccagagaatccacaagtttccaaaccttctccatccccagagaat
ccagacgtttccaaaccttctccatccccagagaatccagaagtttccaaaccttctcca
tccccagagaatccacaagtttccagcccttctgcatccccaaatgacaccggagttccc
agccctgcatccccagaggctccagcagctcccagctcagcaccagcccggccaaacccc
gcagatgtcacatcagacgggactgaagaaacgacagcagcagcagatttgggaggttca
tcgacttctgggggtttcaatggggctggagcagcacccagtggaaatggcaccgaggag
gaacctcccaggacagaggtgccaccaggatgtgaaaacagaacagggatttccatcccc
accctcgagcaaaatcctgactccaaaggcaggctgaggaaggagaggaatctcctgctg
cccatcctggtggccgctctgattttcgtgctgctcatcattgtcctgcttttcatggcg
aagctgaagaaagcccacggagtgtggaagagagaaaatgatgtttcagagcagacactg
gagagttataaatccagatctaacgaagacagcccaggccatgagaagaatggacaagct
gcaaatcccaaatccaacgtgcaatatgtaacagaagaccatgtggaaaccccggagaag
aatctagaaaccccagagaagaatctggaaaccccagagaagaatctggaacccccaggg
aagaatccaggtgacaaaaacctggcaataagtgagaaaatatttgagtgtggaagggag
acagatgtataa
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