Sylvia atricapilla (blackcap): 136371152
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Entry
136371152 CDS
T10263
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136371152 (SRRM1)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
136371152 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136371152
NCBI-ProteinID:
XP_066191130
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Position
24:complement(1116021..1135272)
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AA seq
899 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPASPPAKARRSPSPQQSNRG
RKSRASASPSRPSAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQ
MEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSP
RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRS
PSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQS
PSPSSRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPS
ANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAA
AAAAVVAADTTSVQGDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaggaagaaataaaacaacgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaagac
aacagagagaaaagagacagatccaggagtccaagaagacgcaagtcccgctcgccgtcc
ccgcggcggaggtcgtcgcccgtgcgccgcgagcgcaagcgcagccactcccgctcgccc
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccacccct
gagccagagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcgaacagt
gatattccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagggagaaggagaaggagaagactcgtcagagatcccca
actcgatccaagtccaggtcaagatcccgatcccgttctccatctcattctcgacccaga
aggcgccatagatcacggtcgagaaggcgacccagcccgcggcgccggccgtccccgcgc
aggaggagcccgccccgcagaatgcctcctccacccaggcacaggaggagcagatccccc
gtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcctcctcgtcg
tctcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccctccccgc
aaaacacggcggctgtccccgtcagccagccccccacggcgccgccaccggccctcgccc
cccgccagccccccggccaaggcccggcgctcgcccagcccgcagcagtccaaccgcggc
cgcaagagccgcgcctccgcctcgcccagcaggccttcagcacccaagcataagagtact
gagaaaagagaatctccttcgccagcacccaagcccaggaaagcagaattgtcggaatca
gaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaggaggag
aggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccgccggcactcgcac
tcgcgcagcccctcgccctcgccccgcaagcgccagaaggaatcctcccctcggatgcag
atggaaaagaggtggcaatcaccagtgatgaaaagcaggaggaggaggagcccctcgccg
ccccccgcccgccggcgccgctccccttccccggcgcccccgccccggcgccgccgctcg
ccgtcccctcctcgcagaaggtctccatcaccacccccgcgcagacgttctccctctcca
cggagatactcccccccgatccagaggcgatattccccatctccccctcccaagaggaga
acagcttctcctcctccccctcccaaaagaagggcctccccttcccctcagtccaagcgc
agagtctcccactccccaccgccaaagcagaggagctcccctacagctaaacggcgctcc
ccttctgtatcttccaagcataggaagggctctcctcccagcagatccaacagggaaaca
cgttctccaccacaaaacaaaaggcattcaccttcaccacggcctcgagcttcccacccc
tcctccagccctcctccaccacgccgaggagcgtcggcgtcaccacagaggagacagtca
ccctcccccagcagcaggcccatcaggagggtgtccaggacaccagaacccaagaaaaca
aaggcttccacccccagcccccggcgcgtgtcctcgtcccgctctgcgtcagggtcacct
gagacagctcccaaaaagcaccaaggacctgcctctcctgcccgctctcgctctccttct
gcaaactggtcacctgcaaaaaaggccaagagcccaacccagagcccatcacctgccagg
aattcagatcaagaaggtggtggcaagaagaagaagaaaaagaaggataagaagcataaa
aaggataaaaagcacaagaaacacaaaaagcataagaaggagaaggcggcggcggccgca
gcggctgctgctgtggttgcagcagacaccacctcagtacagggagaccaggaagcagag
acagaacccaaaaaggagacagaaagtgaacccgaggacaacctggatgacctagaaaag
cacctgagggagaaggccctgaggtccatgaggaaggcgcaggtgtcccccccctcctag
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