Sylvia atricapilla (blackcap): 136371206
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Entry
136371206 CDS
T10263
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
sati
Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecule (CAM) interaction
sati04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136371206 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136371206 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sati00535
]
136371206 (SDC3)
Proteoglycans [BR:
sati00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
136371206 (SDC3)
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Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
136371206
NCBI-ProteinID:
XP_066191218
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Position
24:5885744..5925865
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AA seq
433 aa
AA seq
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MPGEVPPPAPRGLRSLPLLLLLLLSARAALAQRWRNENYERPVDLEGSGDDDPFGEDELD
DIYSGSGSGYFEPELGLDTAVSLTTDTLVTLPTTAAVLPVTAAQPVATPLEPSPTPQDTT
PGQATSAFLIPRTTEALVVPSWKVTTTTSTAASEPPTTTATTTTTAATTATMAITATTAT
TATTATTTTEATTTTTTAMAKPTTIRRFLPPLATKAATARATTLETPTTLVPKTSTPTEV
ATSRLVPTSTAKPRALPKPSTSRTAGLPEKSTAWPPTATTLPPTEAPQMEPGEVTTVPDS
ELEVPASSGPSGDFEIREEEETTRPDLRNEVMAVVTPPAGPGPGRNVETGLMDNTIDSGN
SAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANV
TYQKPDKQEEFYA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggaggtgccgccgccggcgccccgggggctgcggagcctcccgctgctgctg
ctgctgctgctcagcgcccgcgccgcgctggctcagcgctggcgcaatgagaactacgag
aggcccgtggacctggagggctctggggacgatgatccctttggagaagatgagctggac
gacatctactccggctctggctcggggtatttcgagccggagctggggctggacacggcc
gtgagcctgaccacggacacgctggtgacactgcccaccacggcggccgtgctgcccgtc
accgccgcccagcccgtggctacccccctggagccgtcccccacgccccaggacaccacc
cctgggcaggccaccagcgccttcctcatccccaggaccacggaagcactggtggtgccc
agctggaaagtgaccaccaccaccagcaccgcggccagcgagcccccaaccaccacggcc
accaccaccaccaccgcggccaccacggccaccatggccatcacggccaccacagccacc
acggccaccacggccaccaccaccacagaggccaccaccaccaccaccacggccatggcc
aagcccaccaccatccggaggttcctgccccccttggccaccaaggcggccaccgcccgg
gccaccaccctggagacacccaccacgctcgtccccaaaaccagcaccccgacagaggtg
gccacgtcacgccttgtccccaccagcacggccaagcccagggccctgccaaagcccagc
acctcgaggactgcagggctccccgagaaaagcacggcctggccgcccacggccaccacg
ctgccgcccaccgaggccccccagatggagccaggggaggtgacaacagtccccgacagc
gagctggaggtcccggccagcagcggccccagcggggactttgagatccgggaggaggag
gagacgacgcgtcccgacctccggaacgaggtgatggctgtggtgacaccaccggcgggg
ccggggcccggcaggaacgtggagacggggctgatggacaacacgatagactcgggcaac
tcggctgctcagctgccccagaaaaacatcctggagaggaaagaggtgttgatagcggtg
atcgtgggcggcgtggtgggtgccctgttcgccgccttcctggtgatgctgctcatctac
cgcatgaagaagaaggacgagggcagctacaccctggaggagcccaagcaggccaacgtc
acctaccagaagcccgacaagcaggaggagttctacgcgtag
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