Sylvia atricapilla (blackcap): 136371232
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Entry
136371232 CDS
T10263
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136371232 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136371232 (SFPQ)
03041 Spliceosome [BR:
sati03041
]
136371232 (SFPQ)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136371232 (SFPQ)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136371232 (SFPQ)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136371232 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
136371232
NCBI-ProteinID:
XP_066191261
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Position
24:complement(2705981..2720905)
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AA seq
600 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMAGGPQGPGGPPG
GGPKPEPPKPPTSTSAPPSSSSSASATTAGPTGSQAGAPPSSALPAGQQPQQQPPVSAPS
SAPSGPQPQTKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPHKGGPGHRGGPGGEPR
GRGQPHQGQQSLGTQPGSGERSEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEF
EYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMDPRER
DMRMGGAATMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMVKMKAE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcgcttccgtagccgtggcggtggtggtggtggctttcatcggcgcggc
ggcggtggcggccgcggcggccccaaccacgatttccgctcgccgccgcccggcatgggt
atgggacagaaccgcggtccgatggcgggaggcccgcaaggcccaggcgggccgccggga
ggaggcccgaagcccgaaccgccgaagccgcccacgtcgacctccgctccgccttcttca
tcctcctcagcctccgccaccacggcgggacccaccggcagccaggcgggagcccctcca
tcctcggcgcttcccgcggggcagcagccacagcagcagccgccggtttcggctccctcc
tctgctccctccggcccacagccgcaaaccaagcccagccccagccccacgccggccggc
ggccctaagaaaggacaaggacagtctcccggcggcggccccaaagggcccggcggcccg
cagcagggcccacacaaaggtggcccagggcaccgcggcgggccgggcggggagccgcgg
ggccgcgggcagccgcaccagggccagcagagcctggggacacagccgggctcgggagaa
aggagtgagaagctgtcggacgaggggtttaaagcgaacctctctctgctgaggcggccc
ggggagaagacgtacacacagcgctgccggttgtttgttgggaatttgcctgctgatatc
acagatgaagactttaaaagactttttgccaaatacggggagccaggagaggtttttatc
aacaaggggaaaggctttggattcattaaattggaatctagagctctcgcagaaatcgca
aaggcagagttggacgatacccccatgaggggccggcagctccgcgttcgctttgccact
cacgccgctgccctgtcggtgcggaacctctcaccctacgtgtccaacgagttgctcgag
gaagctttttcccagttcggtcccgtggaaagagctgttgtgattgtagatgatcgaggt
agatcaacaggaaaaggcattgttgagtttgcatccaagccagctgcaaggaaagctttt
gaacggtgtactgagggggtgtttttgttgacaactactcccaggccagttattgtggaa
ccattggaacaactggatgatgaagatggtcttccagaaaagcttgctcagaagaatccg
atgtatcaaaaggaaagagagactcctccccgttttgctcagcctggcagttttgaattt
gaatattcccagagatggaaatctttagatgaaatggagaagcagcagagagagcaagtg
gcaaaaaacatgaaagatgccaaggacaaacttgaaagtgaaatggaagatgcttatcat
gagcatcaggcaaacctcctgcgtcaagacctcatgaggcgccaggaggagctgaggcgt
atggaagagctccataatcaggaaatgcaaaaacgcaaggaaattcagctgaggcaggag
gaggagcgtcgccggcgggaggaggagatgatgatccgtcagcgggagatggaagagcag
atgagaagacagagggaagaaaactatagtagaatgggttacatggatccaagggagcga
gacatgagaatgggtggtgctgccacaatgaacatgggagatccttatgcttcagcagcc
cagaaattcccacctctgggaggtggtggcggcataggttatgaagctaatccaggagtt
ggccaagcagccatgagtggttctatgatgggaagtgacatggtgaagatgaaagctgag
tga
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