Sylvia atricapilla (blackcap): 136371290
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Entry
136371290 CDS
T10263
Symbol
SCMH1
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136371290 (SCMH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136371290 (SCMH1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
136371290 (SCMH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
136371290
NCBI-ProteinID:
XP_066191407
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Position
24:complement(4642529..4709857)
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AA seq
694 aa
AA seq
DB search
MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPP
ANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLE
AVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQP
PGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMP
TPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAM
QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHM
QRSHEYDHDRYLPDRSSSLDGSLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGET
FVLADGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLPGYRHLHQPSSLSQGSTSALR
RLSSGGSDRYLGSRDVSRLSSRDPSSWTVEEVMQFIRESDPQLGPHADLFRKHEIDGKAL
LLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaccaggccctcagaaagccatagactggaaagatggtaaaaagcacaagtac
agccgcccgtcagagtctccctcccagtaccaaggccatttcacctgggagaagtacctg
aaagagacatgtgccatcccagctcctgcccattgtttcaagcagtcctacactccacct
gcaaacgagttcaagatcagtatgaagctggaggcccaggacccccggaacaccacgtcc
acgtgcatcgccaccgtggtggggctgacgggcgcccgcctgcgcctgcgcctcgacggc
agcgacaacaagaacgacttctggaggctggtggactctgctgagatccagcccattggg
aactgtgagaagaatggaggcatgctgcagcctccactgggcttccggctgaatgcctcc
tcctggcccatgttccttctgaagactctgaatggagcagagatggctcctgtccggatt
tttcacaaggaaccaccatctccttcccaaaacttcttcaagacaggtatgaagctggag
gcagtggacaggaagaaccctcacttcatctgcccggccaccattggggaggtgagaggt
tctgaggtcctgataacatttgatggctggagaggtgccttcgattactggtgccgatat
gattcccgggacatctttcccgtaggctggtgttcgctgactggagataatctgcagccc
cctggtacaaaagttgtgattccaaagagccctttacctgcctccgaagtaaactcggag
aaacctagcatgcacagtagcacaaagactgttttggggcatcaacaagggcaaaggcgt
cgcaaaacagggaagaagcgtggtcgaacgaccaaagcgctaatccaccaccccatgcct
acaccctccaagtcagtggagcctttgaaattccccagaaagagaggccccaagcctggc
agtaagaggaaacctaggacattgctgaacccagcacccacctctccaacaaccagtacc
ccagagccagacacaagcactgtgccccaggacgctgctacaatccccagctctgccatg
caggctcccacagtttgcatttacttgaacaagaacggcagcactgggccccacctagac
aagaagaaagttcagcagctgccagaccattttggaccagctcgagcttctgttgtcctg
cagcaagcagtacaggcctgcattgattgtgcttatcatcagaaaacagtcttctccttc
ttaaaacaaggccacgggggagaggtcatctcagctgtgtttgatcgggaacagcacact
ctgaacctgccagcagtaaacagtatcacctacgtcctccgcttcctggagaagctgtgc
cacaatctgcgcagtgacaacctctttgggaaccagcctttcactcagaacagccacatg
cagcgctcacacgagtacgaccacgacaggtatctaccagacagaagcagttcgttagac
ggctctctgcagggaccaggccggggtacaaagcgctattcccaagattcccctccatac
agtgctcctctctcccccaagttaccaaagaatgaccgtcaccctttggaaggtgaaacc
tttgtcctggcagatggcctcccagggcccttagagcctcgcctggaccccatggactct
gccttgaactctgtcaattcatccagccacagcaggagctccagagactatcgcctgcca
ggatacaggcacctgcaccagccctctagcctcagccagggcagcacctctgccctgcgc
aggcttagctctggggggtcagacaggtacctgggctcccgggacgtctcccggctcagc
agccgtgacccctcgtcctggaccgtggaggaggtgatgcagttcatccgtgagtcagac
ccacagctgggcccccacgctgacctcttcagaaaacatgagatcgacgggaaagccctg
ctcttgctgcggagtgacatgatgatgaagtacatggggctgaagctgggcccagccctg
aagctcacctaccacatcgacaagctaaagcaaggcaagttctga
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