Sylvia atricapilla (blackcap): 136371323
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Entry
136371323 CDS
T10263
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sati Sylvia atricapilla (blackcap)
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136371323
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136371323
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136371323
microRNA pathway
RISC loading complex
136371323
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
136371323
NCBI-ProteinID:
XP_066191471
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Position
24:2978270..3001289
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AA seq
857 aa
AA seq
DB search
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccttcgggagcagctgcaggcgcatacctgccccccttgcagcaggtg
tttcaagcaccacgtcggcctgggataggaactgttggcaagcccatcaagctcctggcc
aactactttgaagtggacattcccaagatcgatgtgtatcattatgaagtggatatcaaa
cccgataaatgtccacgcagagtcaacagggaagtcgtggagtacatggtgcagcacttc
aaaccacagatctttggtgaccgaaaaccagtctatgacgggaagaagaacatctacact
gtcacagccttacccattgggaacgagcgggttgactttgaggtgacgatcccaggggaa
ggcaaggacaggatatttaaggtctctatcaaatggatggccatcgtgagctggcgcatg
ctgcacgaggccctggtcagtgggcagatccctgtcccactggagtccgtccaggcactg
gatgttgccatgaggcacctggcttccatgaggtacactcctgttggccgctccttcttc
tcccctcctgaaggctactaccaccccctgggagggggcagggaggtctggtttggtttc
caccagtcagtgcggcctgccatgtggaagatgatgctcaacattgatgtgtcagccact
gccttctacaaagcccagccagtcatcgagttcatgtgtgaggtgctggacatccggaac
atcgacgagcagcccaagcccctgacggactcgcagagagtgcgtttcaccaaggagatc
aaaggtctgaaggtggaggtgacccactgtgggcagatgaagaggaaataccgtgtgtgt
aacgttacccgacggccagccagccaccagacgttcccactgcagctggagagtggtcag
acagtggagtgcacagtggctcagtacttcaagcagaaatacaacctgcagctgaagtac
cctcacttgccctgtctccaggttggccaggaacaaaaacacacgtaccttcccttggag
gtgtgtaacatcgtggcaggccagcggtgtatcaagaagctgacagacaatcaaacgtca
accatgataaaagcaacagccaggtctgccccagacaggcaggaggagatcagtcgcctg
atgaagaatgccagctataacctggatccatacattcaggagtttgggatcaaggtgaag
gatgatatgacggaggtgacagggcgggtcctgccagctcccatcctgcagtatggtggc
cggaaccgggccattgcaactcccaaccagggcgtgtgggacatgcgagggaagcagttc
tacaacggcattgagatcaaagtctgggccattgcctgctttgccccgcagaagcagtgt
cgagaggaggtgctgaagaacttcacagaccagctgcgcaagatctccaaggacgccggg
atgccgatccagggccagccctgcttctgcaagtatgcccagggtgcagacagcgtggag
cccatgttcagacacctcaagaacacctattcagggctccagctcatcattgtcatcctg
ccagggaagacaccagtgtacgccgaagtgaagcgtgttggggacactctgctgggaatg
gccacacagtgcgtccaggtgaagaatgtggtgaaaacctccccacagaccctttccaac
ctctgcctcaagatcaacgtcaagcttggcgggatcaacaacatccttgtgcctcaccag
cgctctgccgtctttcagcagccagtgatcttcctcggggctgatgtcactcacccgcca
gcaggagatgggaagaaaccctctataacggctgttgtgggcagcatggatgcccacccg
agccggtactgtgccacggtgcgcgtgcagcgtcctcgccaagagatcattgaggacttg
tcctacatggtgagggagctcctcatccagttctacaaatccacacgcttcaaacccacc
aggatcatcttctaccgcgatggtgttcctgaggggcagctcccacagatccttcactat
gagcttctggcaatccgagacgcctgcatcaaactggaaaaggattaccagcctggcatc
acctacatcgtggtccagaagaggcatcacacccgtctcttctgtgcagacaagaacgag
aggattggaaagagtgggaacatcccagcaggaacaacagtggataccaacatcacccac
ccctttgagtttgacttctacctgtgcagtcatgcaggcattcagggcacgagccggccg
tcccactactacgtgctctgggatgacaaccggttcacggcggacgagctgcagatcctc
acgtaccagctgtgccacacctacgtgcgctgcacccgctccgtctccatcccggcccca
gcctattacgcccggctggtggcgttccgggcacggtaccatctcgtggataaggagcac
gacagtggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttg
gcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttga
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