Sylvia atricapilla (blackcap): 136371327
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Entry
136371327 CDS
T10263
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03082
ATP-dependent chromatin remodeling
sati03083
Polycomb repressive complex
sati04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136371327 (RBBP4)
03083 Polycomb repressive complex
136371327 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
136371327 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136371327 (RBBP4)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
136371327 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
136371327 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
136371327 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
136371327 (RBBP4)
PRC2.2
136371327 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
136371327 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
136371327 (RBBP4)
Chromatin remodeling factors
NuRD complex
136371327 (RBBP4)
NuRF complex
136371327 (RBBP4)
NuRF complex (fruit fly)
136371327 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
136371327
NCBI-ProteinID:
XP_066191477
LinkDB
All DBs
Position
24:complement(1784982..1792443)
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcagcctttgatgatgcggtggaagagcgtgtgatcaacgaagag
tataaaatatggaaaaagaacacccctttcctgtatgatctggtgatgacccatgccctg
gagtggcccagcttgactgctcagtggcttcctgatgtcacaagacctgaaggcaaagat
ttcagcatccacaggttggtgctgggcacccacacctcagatgaacaaaaccacctggtg
attgccagtgtgcagctgcccaatgatgatgcccagtttgatgcttcccactatgacagt
gagaaaggagagtttggaggctttggctcagtaagtggaaaaattgaaattgagatcaag
ataaaccacgagggagaggtgaacagagcccgttacatgccccagaacccctgcatcatt
gccaccaagactccctccagtgatgtgctggtctttgattacaccaaacacccctccaaa
ccagatccttctggggagtgcaacccggacctgcgtctccgtgggcaccagaaggaggga
tatgggctctcctggaaccccaacctcagcgggcacttgctcagtgcttctgatgaccat
accatttgcttgtgggatatcagcgctgttcccaaagaaggcaaagtggtggatgccaag
accatcttcacgggacacacagccgtggtggaggatgtgtcctggcacctgctccatgaa
tccctctttggatctgttgctgatgatcagaagctcatgatctgggacaccaggtcaaac
aacacttccaaacccagtcattccgtggatgctcacacagctgaggtgaactgcctctcc
ttcaacccctacagtgagttcatcctggccacaggatcagctgataagactgttgctcta
tgggacttgaggaatctaaagctgaagctgcactcctttgaatcacataaagatgaaata
tttcaggttcagtggtctccccataatgaaaccatcctggcctccagtggcacagaccgc
aggctaaatgtttgggacttgagtaaaattggagaggagcaatcccctgaagatgctgag
gatggtcccccagagctgttgtttatccatggtggtcacactgcaaagatctcggatttc
tcctggaatcccaatgagccctgggtcatttgttctgtatcagaagataatatcatgcaa
gtctggcaaatggcagagaacatctacaacgatgaagatcccgaaggaagcgtggatcct
gaaggtcaaggatcctag
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