Sylvia atricapilla (blackcap): 136371616
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Entry
136371616 CDS
T10263
Symbol
RBM15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136371616 (RBM15)
03041 Spliceosome [BR:
sati03041
]
136371616 (RBM15)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
136371616 (RBM15)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136371616 (RBM15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
136371616
NCBI-ProteinID:
XP_066191908
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All DBs
Position
25:complement(4708693..4717008)
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AA seq
940 aa
AA seq
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MKGKERSPAKAKRSRGGEDSASSSSSSRGSKKPSGSSGGGGGSNGGKAAAASSESNSGSG
RRGAHADKGGRAGSREYETGSAAAAGGGGRHGYSGKTAEASRSSSSRGGESRAAAAASSS
SSSEPGGGEYKTLKISELGSALSDEAVEDGLFHEFKRFGDVSVKISRLPPGAGAADERVA
FVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVGGGSGRRRSSRSPALLDKESPYGTAA
VGAVAAAVRHPPAGAAQRALSPAGSGGALGYRDYRLQQLALGRLPPPPPLPRELERDRDY
GGFYEARVRPAYGLERVAGVAAAGGFRGGGGGGAGAAGEEEISPEDDQRANRTLFLGNLD
ITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLDMAHRAKLAMSGKVLLRN
PIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDA
AQAACTHMRGFPLGGPDRRLRVDFADTEHRYQQPYLQPLPLPPPAHYELVAEAAAFGAHR
GAPPDPLRGARDRTPPLLYRDRDRDLYPETEWVPPPPPVRDRSNRAAAYDPLESLERRRD
GWSLERDRGERELGSSSRDQPRKRRLAEDGGRHLDRSPDSERSSSSRKRHCLATTSPPDR
SPELLGGRERYSNDPERSSRLLLLERPSPIRESRRGSLERGQNEKRDRKNSAERERKHRV
AAAAQECKSPAKKDERAAEGGGGGSRLKPPPQKQQQDGAAQAGAAPKLCLAWQGMLLLKN
SNFPSNMHLLQGDLGVASSLLVEGATGGKVAQLKITQRLRLDQPKLDEVNRRIKVAGPNG
YAILLAVPGASDARSAAGAAEAATTSTQRPLRNLVSYLKQKQAAGVISLPVGGNKDKENS
GVLHAFPPCDFSQQFLDSTAKALAKSEDDYLVMIIVRGAS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaaggagcgctcgcccgccaaggccaagcgctcccggggcggcgaggactcg
gcgtcctcctcctcgtcctcgcgcggcagcaagaagccgagcggctcgtccggaggaggc
ggcggctccaacggcgggaaagcggcggcggcgtccagcgagagcaacagcgggagcggc
cggcgcggcgcccacgcggacaagggcggccgcgccggcagccgcgagtacgagaccggt
tcggcagcggccgcgggcggcgggggccggcacggctacagcggtaaaaccgcggaggcg
tcgcggagcagcagcagccgcggcggagaatcgcgggcggccgccgccgcctcctcctcc
tcctcgtcggagccgggcggcggcgagtacaaaacgctgaagatcagcgagctgggctcg
gcgctgagcgacgaggcggtggaggacgggcttttccacgagttcaagcgcttcggcgac
gtgagcgtcaagatcagccggctcccgcccggcgccggcgccgccgacgagcgcgtggcc
ttcgtcaacttccggcggcccgaggacgcgcgcgccgccaagcacgcccgcggccgcctc
gtgctctacgaccgcccgctcaagatcgaggccgtctatgtcggcgggggcagcggccgc
cggcgcagcagccgctccccggcgctgctggacaaggagtctccctacggcacggcggcg
gtcggggcggtggcggcggccgtgcggcacccgccggccggggccgcgcagcgggcgctg
tccccggcgggcagcggcggagctttgggataccgggactaccggctgcagcagctcgcc
ctgggccggctcccgccgccgccgccgctgccgagggagctggagagggaccgggactac
ggcggcttctacgaggcgcgggtgcggccggcctacgggctggagcgcgtggccggagtg
gcggcggccgggggcttccgtggaggaggaggaggaggcgccggagcggccggtgaggag
gagatcagccccgaggatgaccagagagccaaccgcacgctgttcctgggcaacctggac
atcaccgtgagcgagtcggacttgcgacgagcttttgaccgttttggggtcatcactgag
gtggacatcaagaggccggggcgcgggcaaaccagcacctatgggtttcttaagtttgag
aatctggacatggcgcaccgggccaagttggccatgtcagggaaggtgctgctgcgtaac
cccatcaagatcgggtacgggaaagccaccccgaccacccggctctgggtgggcggcctg
gggccctgggtgcccttggccgccctggccagggagtttgatcggtttggtaccatccgc
accatcgattaccgcaaaggggattcctgggcctatatccagtacgagagcctggacgcg
gcgcaggcggcctgcacccacatgcggggcttccccctgggggggccggaccgccggctc
cgcgtggactttgccgacacggagcatcggtaccagcagccctacctgcagcccctgccc
ttgccgcccccggctcattacgagcttgtggcggaggcggctgcttttggggctcaccgg
ggagccccccctgaccctctccggggggcccgggacaggacgccaccgttgctctataga
gaccgtgacagagacctttatcccgagacagagtgggtgcccccgccgccccctgtgcgg
gaccggagtaatcgggcagctgcctatgacccactggaaagcctggagcgccgccgggat
gggtggtccttggagcgggaccgcggggagagggagctgggcagtagcagtagggatcag
cctaggaaacggagactggcggaggatggaggccgccacttggaccgttccccggacagc
gagcgctcctcttcctcccgaaagcgccactgcttggccacaacctctcccccggaccgc
agccccgagctcctggggggccgggagcggtacagtaatgaccctgagcgctcatcccgc
ttgctcctcttggagcgaccttcccccatccgggagtcccgccggggcagcctggagcgg
gggcagaacgagaagcgagaccgcaagaactccgcggagcgggagcgcaagcaccgcgtc
gccgccgccgcccaggagtgcaaaagtccggccaaaaaggacgagcgggcggccgaggga
ggtggcggaggctcccggctcaaacctcctccccagaagcagcagcaggacggagcggcg
caggccggagcggcacccaagctgtgcttggcttggcaggggatgctcctgctgaagaac
agcaacttcccgtccaacatgcacctgctccagggggacctcggcgtggccagcagcctc
ctcgtggagggagcgactgggggcaaagtggctcagctcaagatcacccaacgtctccgt
ctggaccagcccaagctggacgaggtgaaccggcgcatcaaggtggcgggtcccaatggc
tacgccatccttctggccgtgcccggcgcctcggacgcgcgctccgcagccggggctgcc
gaggccgccaccacctccacgcagaggccgctcaggaatctggtgtcctacctaaagcaa
aagcaggctgctggggtgatcagccttcctgtgggggggaacaaagacaaggagaacagc
ggggtgctgcacgcctttccgccctgcgatttctcccagcagttcctggactccacggcc
aaggcgttggccaaatcagaggacgactatctggtcatgatcattgtccgtggggcgtcc
taa
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