Sylvia atricapilla (blackcap): 136371663
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Entry
136371663 CDS
T10263
Symbol
NFASC
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin
KO
K06757
neurofascin
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecule (CAM) interaction
sati04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136371663 (NFASC)
04517 IgSF CAM signaling
136371663 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136371663 (NFASC)
Cell adhesion molecules [BR:
sati04515
]
Immunoglobulin superfamily
L1 family
136371663 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Ig_5
BiPBP_C
DUF4293
Motif
Other DBs
NCBI-GeneID:
136371663
NCBI-ProteinID:
XP_066192001
LinkDB
All DBs
Position
25:complement(2052676..2126684)
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AA seq
1488 aa
AA seq
DB search
MGFWLLRHGSVSLRVTKPRGGSAGARGXGWGPWEGGDSATLGGAPSLREGRTRLVLPLRK
SILGRGKKKNKKSIGKEKKNAPGLGCGAGKRRAPSAEDPSARATPRDTPKSPQGTPQGPE
ATQGSSKMIPRRFQVTCARIAFVLCLQRLISAIEVPLDLPQPPTITKQSIKDYIVDPRDN
IFIECEAKGNPTPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQC
FARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSS
SMEPIPQDKRVSQGQNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKS
HNETSLGNSPAMYRARGIAETTPSFMYPYGISSSQMVLRGVDLLLECIASGVPAPDIMWY
KKGGELPVGKTKLENFNKTLRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLD
EPENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIETAPPNPSREVAGDTIVFRDTQIG
SSAVYQCNASNEHGYLLANAFVSVLDIQPRILGPKHQLIRVIENNRTRLDCPFFGSPIPT
LRWFKNGQGNMLDGGNYKAHENGSLEIFMARKEDQGIYTCVATSILGKAEAQVRLEVKDP
TRIVRGPEDQVVKRGDMPRIHCRVKHDPTLRLMVTWLKDNVPLYLGSRMKKEEDGLTIHG
VVEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRSRELPKERPDRPRDLELTDLAERSV
RLTWIPGDDNNSPITGYIVQFEEDRLQPGIWHYHSRYPGNVNSALLSLSPYVNYQFRVIA
VNDVGSSAPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAFGPNLRYI
VRWRRREPRGSWHNETVRGARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDY
PKAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFV
SFPGDRNRGTVSRLFPYSNYKLEMVVTNGRGDGPRSETKEFPTPEGVPSPPRYLRIRQPN
LEIINLEWDHPEHPNGIITGYTLRYYPFNGTRTGRTVMENLSPNQTRFSLQRSDPISRYH
FVLRARTQVGEGEALVEDSPALLDEATPSPEATGPPPTTGEETSPETSPEISPTISPTIS
PTISPTVSPTVSPTTIPTTTTTTTTATSTAASTSAAAERAPAATTRHELAANGSSIWDIR
AMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPSSVQLADLTPGMMYKLW
VFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRG
GKYPVRDNKDEHLNPEDKNVEDGSFDYRSLESDEDNKPLPNSQTSLDGTIKQQESDDSLV
DYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgggattttggctcttacgtcacggctccgtgtccctgcgtgtgacaaaaccccgcggt
ggcagtgcgggggcacgggganccgggtggggaccttgggaggggggtgacagcgcaact
ttggggggggcaccatcgctccgagaggggaggacgcgcctcgttcttcccctccggaag
agcatcctgggccgggggaaaaaaaaaaataaaaaatccatcgggaaggaaaagaaaaac
gcacctggtttgggatgcggagccgggaagcgccgggccccgagcgctgaggatccctct
gcacgtgccaccccaagggacaccccaaagtcaccccaagggacaccccaaggtcctgag
gccacccaggggagctccaagatgatcccgaggagattccaggtcacctgcgccagaatt
gcctttgtcctctgcctccagcgcctcatcagtgccatcgaggtgcccctggacttgccg
cagccccccaccatcaccaagcaatccatcaaggattacatcgtggatcccagggacaac
atcttcatcgaatgcgaagccaaaggcaatcccactcccatcttctcctggacgaggaac
gggaagttcttcaatgtggccaaggatcccaaagtgtccatgaggaggaggtcggggact
ttggtcatcgacttccacagcgggggccggcccgacgactacgagggcgagtaccagtgc
ttcgccaggaacgactacggcacggccctctccagcaaaatccacctccaggtttccaag
tctccgctgtggcccaaggaaaaggtggatgtgatcgaggtggatgagggggccccgctg
agcctgcagtgcaatcccccacccggcctccccgagcctgtcatcttctggatgagcagc
tccatggagcccatcccgcaggacaagcgcgtgtcccaggggcagaacggggacctctac
ttctccaacgtgctggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccac
ttcacccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcc
cataacgaaacgtctttaggaaattcccccgccatgtaccgcgcccgagggatcgcggaa
accactcccagcttcatgtatccctacggaatttccagcagccagatggtgctccgaggg
gtggatctcctgctggaatgcatcgcctccggagtaccagcaccggacatcatgtggtac
aagaaaggcggggagctcccggtgggcaaaaccaagctggagaacttcaacaagaccctg
cgcatctccaacgtgtccgaggaggactcgggggaatatttctgcctggcctccaacaag
atgggcagcatccgccacacgatctcggtgagagtgaaggctgctccctattggctggat
gagccggagaacctgatcctggcccccggcgaggacggcaggctggtgtgccgggccaac
gggaaccccaaaccctccatccagtggctggtgaatggagaacccatcgaaacggctccc
cccaacccgagccgggaggtggccggggacaccatcgtgttccgggacacgcagatcggc
agcagcgccgtgtaccagtgcaacgcctccaacgagcacggctacctgctggccaacgcc
ttcgtcagcgtgctggatatccagccccggatcctgggccccaagcaccagctgatcagg
gtgatcgagaacaacaggacacgcctggattgtccctttttcgggtcccccatccccacc
ctgcgctggtttaagaacggccaggggaacatgctggatggaggcaactacaaagcccac
gagaacgggagcttggagatattcatggctcggaaggaggaccaggggatctacacctgc
gtggccaccagcatcctggggaaagcagaggcccaggtccgcctggaggtcaaagacccc
accaggatcgtgaggggccccgaggaccaggtggtcaagaggggcgacatgccccggatc
cactgccgcgtcaaacacgaccccacgctccggctcatggtcacctggctcaaggacaac
gtacccctctacctgggcagcaggatgaagaaggaagaggacggcctgacgatccacggc
gtggtggagaaggaccagggcgattacacgtgcgtggccagcacggagctggacaaggac
ttggccaaggcctatctcaccgtgctggccatccccgctaaccggtcgagagaattaccc
aaagaacgacctgaccggcccagggacttggagctgacggatctggccgagaggagcgtg
aggctgacgtggatccctggtgatgacaacaacagccccatcacaggttacatcgtgcag
ttcgaggaggaccgcctgcagcccgggatatggcactaccactccaggtaccccggcaac
gtcaactcggccttgctcagcctctccccgtacgtgaattaccaattccgggtgatcgcc
gtcaacgacgtgggcagcagcgctcccagcctgccctccgagcgctaccagaccaacggg
gcacgtcctgaaataaatccaacgggagttcaaggggcagggacccaaaaaaacaacatg
gagataacgtggactcctctgaacgcgactcaggctttcgggcccaacctgaggtacatc
gtgcggtggcggcggcgggagccccgcgggagctggcacaacgagactgttcggggcgcg
cggcacgtggtgtggaacacgcccatctacgtcccctacgagatcaaggtgcaggccgag
aacgacttcggcagggccccggagcccgacacctacatcggatactccggggaggattat
cccaaggctgcgcccacggatgtcaggatcagagtcttaaacagcacagccatagctctg
acctggacccgggtgcacttggacaccatccagggacagctcaaggagtaccgagcctat
ttctggagggacagcagcttgctgaagaacctgtgggtgtccaaaaaacggcagtttgtg
agttttcccggggaccgcaaccggggcaccgtgtcccggctcttcccctacagcaactac
aaactggagatggtggtcaccaacggccgcggggacgggccccgcagcgaaacgaaggaa
ttccccacccctgaaggagtgcccagcccccccaggtacctgcggatccgacagcccaac
ctggaaatcatcaacctggagtgggatcaccccgagcatcccaacgggatcatcacggga
tacaccctccggtactatccctttaacgggacgcggacgggcaggacggtgatggagaac
ctgtcccccaaccagacgaggttctccctgcagaggtcagaccccatctcccgctatcac
ttcgtgctccgcgcccgcacccaggtgggagagggagaggccttggtggaggactcgccg
gcactgctggatgaagccacgccaagcccagaggcaactgggccgcctccaaccacaggg
gaggaaaccagccctgaaaccagccctgaaatcagccctacaatcagtcctacaatcagt
cctacaatcagccctacagtcagccctacagtcagccctacaaccatcccaaccaccaca
accaccaccaccacggccaccagcaccgccgccagcaccagcgccgctgccgagagggct
ccggcagccaccaccaggcacgagttggccgccaatggatcgtccatatgggacatcaga
gccatggcaaacagtaactgggcaaacatcacctggagccacaatttctcggcaggaact
gactttgtggttaagtatatcaccagtaacaagacagagaaatcaatccccgttaaggct
cagggcccgtcctcggtgcagctggcggatctgacgccggggatgatgtacaagctgtgg
gtgttccccatatggtcccaccccagcgagcactcgtacattacctttaccaccagctca
gcctacaccaagaaccaggtggacatcgccacgcagggctggttcatcggcctgatgtgc
gccatcgccctcctcgtgctcatcctcctcatcgtctgcttcatcaagaggagccgcggc
gggaagtatccagttcgggacaacaaggatgagcacctcaaccccgaggacaagaacgtg
gaggacggatcctttgactacaggtctcttgaaagcgatgaagacaacaaacctcttccc
aacagccagacctcgctggacgggacgataaagcagcaggagagcgacgacagcttggtg
gactacggagaagggggcgagggccagttcaatgaggacggctccttcatcggccagtac
acggtcaagaaggacaaagaggagaccgagggcaacgagagctccgaggccacgtccccc
gtcaacgccatttattccttggcatag
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