Sylvia atricapilla (blackcap): 136371708
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Entry
136371708 CDS
T10263
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4
KO
K26226
liprin-alpha
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136371708 (PPFIA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136371708 (PPFIA4)
Membrane trafficking [BR:
sati04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136371708 (PPFIA4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
136371708
NCBI-ProteinID:
XP_066192062
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Position
25:6280615..6314095
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AA seq
1199 aa
AA seq
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MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQ
ETLRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERV
ATLEEQLVDAHRQVAALQQGSTREAAAGERDEREPKEPAPKLPWKRLSNGSVHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAKERHGSIEEHLRQLETQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKRRLSDEIDKLRLEVD
QLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREE
PAKDWEQAQAGGVLATAPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMML
QEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSL
ASSSPPLSGRSTPKITSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDETREDKTTIR
CETSPPSSPRTLRLEKLGHPALSQEDGKSSLEDQASNPSSSQDSLHKGSKRKGIKSSIGR
LFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEA
RRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNA
LHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMPTSTKTTLAYGDMNHEWI
GNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRL
NYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDEN
FDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPR
DVHSINLLSGSAETLPAGFRVTSLVPLPPPAAPAKKMPPEVGASGSPRLETSTVRTYSC
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgagggggacccgctggggcccccccagggc
tcagaggcggatgctgactttgagcagctgatggtgaacatgctggacgagagggacaag
ctgctggacaccctgcgggagacgcgcgagacgctcgctgtcacccagagccgcctgcag
gagacgctccgggagcgggaccagctccagaggcagctgaactcggcactcccacaggag
tttgccacgctgacgcgtgagctcagcgcctgtcgggagcagctcctggagagggaggag
gagatctcagagctgaaagccgagcgcaacaacacccggctcctgctggagcacctggag
tgcctggtgtcacggcatgagcgctccctcaggatgaccgtggtcaaacgccaggcccag
tcgccatctggggtgtccagtgaggtcgaggtgctcaaggcactcaagtcactctttgag
catcacaaggcactggatgagaaggtgagggaacgcctgcgagcagccttggagcgagtg
gccaccttggaggagcagctcgtggatgcccatcggcaggtggcagctctgcagcaaggc
tcaacccgggaggcagcggcgggcgagcgcgatgagagggagcccaaggaaccagcacca
aagcttccctggaagcgtctctccaatggctctgtccacccggatgatgaggctgggcgg
gtggtggagctgcaggagctcctggagaagcagaattttgaagtggtccaggccaaggag
cgaatctctgccttggctgccagtgtggccgagctggaggaggatctgggcactgccagg
aaggatctgatcaaatctgaggaaatgagcagcaagtaccagagagacctccgagaggcc
ctggcacagaaggaggacatggaggagaggatcactacactggagaaacggtacctggca
gcccagcgagaggcgacctccatccacgacctcaatgacaaactggaaaatgagttggcc
aacaaggagtccctgcaccgccagtgcgaggagaaggcgcggcacctgcaggagctgctg
gagctggcggagcagaagctgcagcagacgatgagaaaggcagagacgctgcctgaggtg
gaagcggagctggcccagcgcattgctgcgctcaccaaggcaaaagagaggcatgggagc
atcgaggagcacctccggcagctggagactcagctggaggagaagaatcaggagctggcc
agggcccgccagcgggagaagatgaacgaggagcacaacaagcggctctcagacaccgtg
gatcggctgctgagcgagtccaacgagcggctgcagctgcacctcaaggagaggatggca
gccttggaggagaagcggcgtttgtccgatgagatcgacaagctgaggctggaggtggat
cagctcaagaccaggagtgggacatttgtggagagtgtgcacaccaggtcccacatgggc
agtgccactgacctgcgcttcccactgggagctgtggtccacgccccagccgagcccttc
ggagcagctccagggctgccgcgggcacagaagggacggttcggtgcccggagagaggag
ccagccaaggactgggagcaggcccaggcaggtggggtcctggccacggcgcctcacgcc
ttcgacagcgaccccgatatctctgacatggatgaggatgaccgtgagacactcttcagc
tccatggatgtgctctctcctggtgggcattcagatgcccagacattggccatgatgctt
caggagcagctggatgccatcaatgaagagatcaggatgatccaggaggagaaggagtcc
acggagctccgtgcagaagagctggagacgcgggtcacgagcggcagcatggagggcctg
aacctcacccagctgtgcaagagggcctccatccccacctcgctgacggccctgtccctg
gccagctcatccccaccgctcagcggccgctccacacccaagatcacctcccgcagtgcc
gcgcaggacctggaccgcatggggatcatgacgttgcccagcgacttgaggaagcaccgg
aggaaactgctatcacctgcagctcgggatgagacccgggaggacaaaaccaccatcagg
tgtgagacatccccaccgtcttcacccaggacactgcggctggagaagctgggccaccct
gccctgagtcaggaggatggcaagagctcactggaggaccaggccagcaatcccagcagc
agccaggactccttgcacaagggttccaagaggaaggggatcaaatcctccattgggcgc
ctgtttgggaagaaagagaagggtcgcttgatccagctgagcagagaaggggccacggga
caggtgctgctgactgatgtggaggggggcatccaggaccccctgggattgggcaagctg
ggggctcaggccgagaaggacaggcgcctgcggaagaagcatgaactcctggaagaggct
cggaggaaaggattgccctttgcccactgggatggccccactgttgtgtcctggctggag
ctctgggtggggatgccagcctggtacgtggccgcgtgccgggccaatgtcaagagcggg
gccatcatgtcggcgctgtcggacaccgagatccagcgggagatcggcatcagcaacgcc
ctgcaccgcctcaagctgcgcctggctatccaggagatggtgtccctcaccagcccctcg
gcgccgcccacgtcccgcacgtcctctggaaatgtctgggtcacccatgaggagatggag
aacatgccaacttccaccaaaacgacattggcctatggggacatgaatcacgagtggatt
gggaacgagtggctgcccagcctgggtctgccccagtaccgcagctacttcatggaatgc
ctggtggacgcgcggatgctggaccacctcaccaagaaggacctgcgggtgcacctgaag
atggtggacagcttccaccgcaccagcctccagtacggcatcatgtgcctcaagaggctc
aactatgaccgcaaagagcttgagaggaggagagaggagacccaacacgaaatcaaagat
gtgttagtgtggaccaatgaccaggtcattcactggatccagtccattgggctgcgcgag
tatgggaacaacctggtggagagtggtgtgcatggggccctgctggccctcgacgagaat
tttgaccacaacagcctggcccttgtgctgcaaatccccacccagaacacccaggctcga
caagtgctggagagggagttcaacaacttgcttgccttgggcacagaccgaaggctggat
gatggtgatgacaaaaccttccgtcggacgccatcctggcgcaagcgcttccgcccgcgg
gatgtgcacagcatcaacctcctcagtggctctgctgagaccctccccgctggcttccgt
gtcaccagcctcgtgccactgccccctccagctgctccagccaaaaaaatgcccccggaa
gtcggtgcttctgggtccccaaggctggagacctcaacggtccggacgtactcgtgctga
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