Sylvia atricapilla (blackcap): 136371794
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Entry
136371794 CDS
T10263
Name
(RefSeq) LOW QUALITY PROTEIN: platelet glycoprotein Ib alpha chain-like
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136371794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sati04090
]
136371794
CD molecules [BR:
sati04090
]
Proteins
136371794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_LRWD1
LRR_14
LRR_EndoS
LRR_5
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
136371794
NCBI-ProteinID:
XP_066192165
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Position
26:54789..58077
Genome browser
AA seq
786 aa
AA seq
DB search
MVMWQCSHSKSCXKGQEMGLASQETTAPFLQLWVLIEHWAAPCXHCPRALPGPWAGGGRA
AGDSTVEDLQAMQVPAFTLVTFLALLPPAQPCLSEMNKVKDLLEVNCTGQALSTVPPDLP
ADTGILLLSDNFLESLSTTAFLPFSQLEDIDLANNGLVALHTGALLPSLKELTLSHNALA
ALPVLEGLPALTHLAVAHNSLETLAPGAFRTVPQLQNLDLRGNKMQKLPQEAFAGLRALR
ELDLSDNLLKELPKELLQDLQKLETLWLSGNQLQTLPTDFFPKGRLFMYVFLTENPWHCN
CDLHYLQTWVQKNADIVYQPERGLVETKVEVAPEKVLCHSPAEHRQKPVIHFKLNCSILE
DADEDGEDEYNYGEETTEKATMTPFPLHPFIPKEHMAVPCAVTSSCLPTLTTTRSLLNKP
SFSTPCTSTLSPSTLLEVLTSIRAPSTITPIPASPTMTPRQTSSTATILTAVTIITLHRH
ATLDNATSLPTTMIRSPSSTSGQPQTTLAASTIYGNRMGSTGTFPTISTAVSSTAMVEAS
SIVRSPSPPSVSANTMLSTHAPTLPTPLDTTHFTQPACSPLPAPPPLCPCSIPGQAVPVL
GLQASGDGLQWGQWILRHCCLLHWVLYLASLALLVLTMLGLAVWLGWMCLVGQPSWHQSL
QIQEVWYPLLEWRKSTGNPMMHLSSFKMPLQRPTFCTIKEVELCPKVTYCTIKDLSIQRN
PPASYSFCTTKELWVHHSPLQTSVKPFSRKLMVTDLGFLRTPSSYSLDRGVKAISDVKVK
YAGNTM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtggcagtgcagccacagcaagagctgtngaaaaggacaggagatgggttta
gcttctcaggaaaccacagctcccttcctacaactgtgggtgctgatagagcactgggca
gctccctgctagcactgtcccagagcactgcctggtccatgggcaggaggaggcagagca
gcaggagactcaaccgtggaagatctgcaggccatgcaagttcctgccttcaccctggtc
actttcctggctctgctgcccccagcccagccctgcctctcagagatgaacaaggtcaag
gacctcctggaggtgaactgcacggggcaggctctcagcacagtgcccccagacctgcct
gcagacacaggcatcctgctgctcagcgataatttcctggagtccctctccaccactgcc
tttctgcccttttcccagcttgaggacattgacctggccaacaatgggctggtggctctg
catacgggggctctgctgccatccctgaaggagctgaccctctcccacaatgcactggca
gccctaccagtcctggagggcctgcctgcactcacccacctggctgtggcccacaacagc
ctggagacactggccccgggcgccttccgcacagtgccacagctgcagaacctggacttg
cgaggcaacaagatgcagaagctgccccaggaggcctttgcagggctgagggcactcagg
gagttggacctctcagacaatctcctgaaggagctacccaaagagttgctgcaggacctg
caaaagttggagaccctctggctctcagggaatcagttgcagaccctgcccactgacttt
ttcccaaaggggcgcctcttcatgtatgtcttcctcactgagaacccctggcattgcaac
tgtgacctgcactacctccagacctgggtccagaaaaatgcggacattgtttatcagcca
gagcggggcctggtggaaacaaaggtggaggtcgcacctgagaaggtgctatgccacagc
cctgctgagcataggcagaaacccgtcattcacttcaagcttaactgcagcatcctggag
gatgcagatgaggatggagaggatgaatataattatggggaagaaacaacagagaaagct
accatgacgcccttccccctacatccattcatccccaaagagcacatggccgtgccctgt
gctgtcacctcatcttgccttcctaccctcactaccacaagatctctcctcaacaaacct
tcattcagcaccccttgtacctccaccctttccccgagcactttgcttgaggtgctaaca
agcatcagagctcctagcaccatcactcctataccagccagtcccaccatgacacccaga
cagacctccagcactgccaccattctcactgctgtgaccatcatcaccctgcacagacat
gccacccttgacaatgccacctcactgccaacaactatgatcagaagcccttctagcact
agtggccagccccaaaccacccttgctgccagcactatctatggcaatcgcatggggtcc
actggcacatttcctaccatttccacagcagtgtcttctactgccatggtagaggcctct
tccattgtcagatctccatctcctccttcagtgtcagccaacaccatgctttccacacat
gccccaacactaccaactcccctggacaccacacacttcacccagcctgcatgttccccc
ctacctgctcctcctcccctctgcccatgctccatcccaggacaggctgtacccgtattg
ggtttgcaggccagtggggatggtctgcagtgggggcagtggatactgaggcactgctgc
ctgttgcactgggtgctctacctggcctccttggctctgctggtcctgaccatgctgggt
ctagcagtttggctgggatggatgtgtctggtgggacaaccctcctggcaccagtccctg
cagatccaagaggtgtggtatccactgctggaatggaggaagtcaacaggaaaccctatg
atgcatctcagcagcttcaaaatgcccctccagcgacccacattctgcacaatcaaggaa
gtggagttatgccctaaggttacctactgcacaattaaagacctgagcatacagcgcaat
cctcctgcaagttactccttctgcacaacaaaggagttgtgggttcaccacagtcctctg
cagacatcagtcaagcctttctccaggaagctgatggtcacggaccttggcttcctgagg
accccatcttcttacagcctagacaggggtgtcaaggccatcagtgatgtcaaagtgaaa
tatgcaggtaacaccatgtaa
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