Sylvia atricapilla (blackcap): 136371918
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Entry
136371918 CDS
T10263
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136371918 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sati03009
]
136371918 (REXO1)
Ribosome biogenesis [BR:
sati03009
]
Eukaryotic type
Pre-60S particles
RNases
136371918 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
136371918
NCBI-ProteinID:
XP_066192365
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All DBs
Position
26:complement(1308056..1352521)
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AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLPLG
HGAERGYDPYNPELPRPSLEAEDGTLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNSPVSAAGPQNDSFASLEYNPGSYNFSNNSDYNPTPLAAA
GRSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERADYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASGS
SPSKAGSESESNNEFSSKDQSTKLDGSASQESKEAVLHREDLPNSQKNLAKNSSDKNSKT
VKLCSDKNNKEIENKNKDPKDKTKRKKTDAGKTPSLSEAGKKEKNKNGDKDKVVKKEEKL
KTKNEEKNCKDKSTKVKTDGNLKKPEKQKLEKVDGCKKEKSKSATSSSGKSKSEGVTKGS
EKVGSSKKESQGKAADVKNGKESSGRKNKEKGTKTSLERKKEKVNCAGRGDPKKGRKQRS
LSHVDLFGDESGDEDDKGRPLSSSLFGVSSDLDGADSGSASESDEDRTKKVKRSKLSKSS
SSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKT
EDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLAG
AIQKPSLSLPGEKRRIAHVPNAALTAAAKQSLGSSKVTLGGRSVTPSSDSEAPTLPLKPC
TLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTTKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
AGRAVLFTAEEKKVIDSSCRVCCRCGTEYMVSASGSCIRKEECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccacttccggcaccccccggttgcc
ccggcgccgtgcggagcctccggagcctcgggcgaccccagcgtggggctcccgctcgga
cacggcgcagagcgaggctatgatccctacaaccccgagcttcccaggccctcgctggag
gcggaggatggcactctggctgacattacagatgtcacacctggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaatgaagtggagagggagcagaagaagtac
gaggagctgttggaaaccacgaaggagtttggtgcttcagagggctcctcactcatttca
aacagccctgtgtcagctgctgggcctcagaatgattcctttgcctccctggagtacaat
cctgggagctacaacttcagtaataactcggactacaaccccactcctctggctgctgct
ggtcggtccagtaaatacactttggattcctcccgctccaaggggagctcactggaatat
gtccccaaggctgtagtgcagaataaaaaatacagcagcactgtcactaacaataaatac
gtgattgatgactctaagccttccacagacttggaatatgaccccctttccaattactct
gccaggctgttgggcaaagccacaaccaagggctccaaaagggaaagggctgattatgag
gactcttactctccatcacggaagaagctctgtgaggatcccgacgatgacgaggtgttg
gccaggttctcctcctctgaagatgaggctgaggtggaatataaaacagcttctggcagt
tcaccctcaaaagctggttctgagagtgagtcaaacaatgaattctccagcaaagatcag
agcacgaagttggatggctctgcttctcaggagagcaaagaagcagtactgcacagggag
gaccttccaaattcccagaaaaaccttgccaagaactcatcagacaagaactcaaaaaca
gtgaagttgtgttctgataagaacaacaaggaaattgaaaataaaaacaaagaccccaaa
gacaaaacaaaaaggaagaaaacagatgctggtaaaacaccaagcctcagtgaggctggg
aagaaggagaaaaataaaaacggagacaaagacaaagtggtcaagaaagaagaaaaatta
aaaaccaagaatgaagagaaaaactgcaaagacaaaagcaccaaagtaaaaacagatggg
aacttgaagaaacctgaaaaacagaagctggaaaaagtggatggatgtaagaaggaaaaa
tccaagtctgccaccagcagttcaggaaaaagcaagagcgagggtgtcaccaagggctca
gagaaagtggggagcagcaagaaggagtcgcagggcaaagcagctgatgtgaaaaatggc
aaggaaagctctggtcgtaaaaacaaggagaaagggaccaagacctccctggagcgaaag
aaagagaaggtcaattgtgcaggacgaggagacccgaagaagggtcggaagcagcggagt
ttgagtcacgtcgacctgtttggagatgagagtggggatgaggatgacaaaggccggcct
ttgtcctcctcattgtttggtgtgagctcggacttggatggggctgactctggctcagcc
tctgagagtgacgaggacaggacaaagaaagtgaagcgctcgaagttgtccaagtcatcg
tcatcttcctcaacgtctgatgacattgattattccatccttgagaaagatgtggacttc
gagtcagatcccatggaggagtgtctgaggatctttaatgaatctaaagatgtgaaaact
gaagacaagggaaggctggggaagcagccatccaaagaggaagcaaatgaagaaaagaca
gaagataatttaactactttgtttcctggccaaaaaagaaggatttctcatcttgtcaaa
caaggaaatgcagaggccccgagcaagccggtagtgcggccgtaccgtccccccacggcc
caggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggctggg
gccattcaaaagccctctctcagtttgccaggagaaaagaggaggattgctcatgtgcca
aatgcagccctcaccgcagcagccaagcaaagcctcgggagcagtaaggtgactcttggt
ggtaggagtgtcacaccttccagtgactctgaagcccccacccttcctctgaagccttgc
accttggctgggatggcttccaagactaccagcaccatcgtgcccaaaagggtagcacat
gttccctccttacagagcaccactttacagaggcctgttattcccacagaatttggagct
aaagtcccaaccaacattcgtcagaggtatctcaatctcttcattgatgagtgcctgaaa
ttctgctcctcctcccaggaagcctttgacaaggccctggcagaggagaaggtggcctat
gagcgcagcaccagccgcaacatctacctgaacgtggccgtgaacaccctgaagaagctg
cgcagcctcgtgcccaactccccggccagcaccaccaagacaagtaacaagaaggtggtg
tcccacgaagctgtgctgggagggaagcttgctgccaagaccagctttactctgaaccgc
tcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggag
tacctgatgactgaggagcagctgaaggagaacgggtacccgatgccgcaccccgagaag
gccggacgggccgtgctcttcactgcagaggagaagaaagtgattgactcctcgtgcagg
gtctgctgtcgctgtggcaccgagtacatggtctcagcctcggggagctgcatccgcaag
gaggagtgtgtgcatcactgggggcggctgcgcaagcagagagtgccaggtgggtgggaa
actcactacagctgctgctccggagctgtggggtcaccaggctgccaggttgctaaacaa
catgtgcacgatgggcgcaaggagagcctggatggctttgtgaagacttttgagaagctg
cccacaactgatggttaccctgggatctatgccttagactgtgaaatgtgctacactaag
caaggattggagctgacaagagtaactgtgatcaactcagagctgaaagtggtgtacgac
acctttgtcaagccggactccaaggtggtggattacaacaccagattctccggggtgaca
gaagaggacctggagaacacaagcatcaccctgcgcgatgtccaagctgtcctgctgaac
atgttcagtgcagacaccatattgattgggcacagcttggaaagtgacttatttgcacta
aagctgatccacggcactgtagtggacacagccatcgtgttcccccaccgcctggggctg
ccctacaagcgggccctgcgcacgctgatggccgactacctcaaacgcatcatccaggac
aacgtggaaggacacgactccagcgaggacgcccgcgcctgcatggagctgatggtgtgg
aagatcaaggaggatgcgaaagtgaagcgatga
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