Sylvia atricapilla (blackcap): 136372019
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Entry
136372019 CDS
T10263
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sati03400
]
136372019 (HDGFL2)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
136372019 (HDGFL2)
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GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
136372019
NCBI-ProteinID:
XP_066192565
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Position
26:4345558..4355126
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AA seq
640 aa
AA seq
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MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDVPENDPMAGSDAGDDE
DDPAMATVPTEKVDSDEDSDRGSDHSGLKRKSLAMKMPVTKRPRKSSSDLDQGSPSVTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAAGRKKKKVESGSDSDSKVDSDLEMGNA
TVDMTKSDSDSDSDVSVKKAPRGRKPAEKPPPKPRGRKPKPERVPSSSSSDSDSDSDVDR
ISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEVHSDSDSSAE
DEMAKKGRRGRAKAPSSSDSELEQEKEVKKPAKKQPSELSRKPNQKEKRGRAEEKPRNKP
LKVERGRKKSDPVPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEELGT
LQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMESIQKANKAG
PEKDKGEAEKGQEKLSGAETRNEKGEEETNADLSGPVNGESLSQKSEGTEEKDKSQGPGA
GELEASTEEPHNNSVQDYPKAGLERARGESEAADEEEEES
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccacacagcttcaaacccggggacctcgtcttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgctgacggcgccgtgaaaccccccccgaacaagtac
cccatcttcttcttcggcacccacgagaccgccttcttgggccctaaagatctgttccct
tacgaaaagtataaagacaaatacggcaaaccaaacaagagaaaaggcttcaacgagggc
ttgtgggaaatccagaacaacccccacgccagttacagtgcccctgcgcccgccagctcc
tccgacagcgacgtccccgagaacgaccccatggcggggagcgacgccggggacgacgag
gacgaccctgccatggccacggtccccacggagaaggtggacagtgatgaggactcggac
cgaggcagcgaccacagcgggctcaagaggaaatccctggccatgaagatgcctgtgaca
aaacggcctcggaaatcctccagtgacttggatcagggcagcccctcggtcacagaagag
gagaactcagaaacatcttctgagtcagaaaaaaacagtgaccaggatttcactcctgag
aagaagccagtggcccgggctccacggaggatgccagcagcagggaggaagaagaagaaa
gtggagtctggctctgactccgactccaaagtggactcggatctggagatgggcaatgcc
accgtggacatgaccaagtcagactcggactcagactcggatgtgtcagtgaaaaaggca
ccacggggccgcaagccagctgagaaaccccctcccaagccccggggcaggaaaccgaag
ccagagcgtgtccccagcagctccagcagtgacagtgacagtgacagcgacgtggatcgc
atcagcgagtggaagaggcgggacgaggagcggcggcgggagctggaggagaagaggaag
agggagcaggaggaggagatccggcggctccgggagcaggagaaggaggagaaggagaag
aggaaggagaaggccgagaagggcgaggaggtgcactcggactcggacagcagcgccgag
gatgagatggccaaaaagggccggaggggccgggccaaggctccgtcctcctcggactct
gagctggagcaggagaaggaggtaaagaagccggcaaagaaacagccctcggagttgtca
aggaaaccaaatcagaaggagaagaggggccgagcagaggagaagccacggaacaaacct
ctgaaagtggaacgaggccggaagaaatccgaccccgtccctgaaaggaggatggagaag
aaaaaggagcccacagtggaagagaagctccagaaacttcacagtgagatcaagtttgcg
ctgaaggtggataacccggacatcaagcgctgtctgaacgcgctcgaggagctgggcacg
ctccaggtcacttcccacatcctccagaagcacacggatgtggtggccacgctcaagaag
atccggcgctacaaagccaacaaggacgtgatggaaaaggccgccgaggtctacacccgg
ttgaagtcgcgtgtgctgggaccaaagatggaatccatccagaaagccaacaaagctggg
cctgagaaggacaagggggaggcagagaagggccaggagaagctgtcgggagcggagaca
cggaatgagaagggggaagaggagacaaatgctgacctgtcaggtcctgtgaatggtgaa
tccctgtcccaaaagtcagagggcacagaggagaaggacaagagccaagggccaggagct
ggggagctggaggcatccacagaggagccccacaacaacagtgtccaggactatcccaag
gccgggctggagagagctcggggggagtcggaggctgcggatgaggaggaggaggagagc
tga
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