Sylvia atricapilla (blackcap): 136372044
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Entry
136372044 CDS
T10263
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136372044
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sati03310
]
136372044
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136372044
Nuclear receptors [BR:
sati03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
136372044
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GFIT
Motif
Pfam:
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
136372044
NCBI-ProteinID:
XP_066192608
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All DBs
Position
26:1402289..1408033
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AA seq
391 aa
AA seq
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MSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGTKDEPEPLSRVYTTSVSSGLSDLDD
ISTLSDGLLFDFPLTPDGSSTYYNLDLLASAQPSPDQSSLDVADATLIKQESIYELMLEP
ALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKRLAWSLYSPEEVRAL
QSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLKAGCLEVLLIRMIRA
FNPLNNTVLFEGKFGGMQMFKSLGCDDLIGAIFELGRTLCRLQLSDEELALFTAAVLLSP
DRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLMKTICNLHLDKLEFF
RLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgatgcggtgaagtttggccgcatgtccaagaagcagcgggacagcctctat
gccgaggtgcagaagcaccagcagagccaggagcagagcggtggcaccaaggatgagccc
gagcccctgagccgtgtctacaccacgagcgtcagcagcggcctctcggacctggacgac
atctccacgctgtcggacgggctcctcttcgacttccccctgacccccgatggcagcagc
acctactacaacctggacctgctggcctcggcgcagccctcgcccgaccagtccagcctg
gacgtggctgacgccacgctcatcaagcaggagtccatctatgagctgatgctggagccg
gcgctgttggcacacggggcgctggagggtgcccagctgccccctgacatctctgtcctg
gagattgaccgagtggcccagaacgtggtgaagtcgcacctggagacgtgtcagtacaca
acggaggagctcaagcgcctggcctggagcctctactcccccgaggaggtccgtgccctg
cagagcaagagctgtgaggccatgtggcagcagtgctcgctgcagatctccaacgccatc
cagtatgtggtggagttcgccaagcgcatcgacggcttcatggagctctgccagaatgac
cagatcatcctcctgaaagccggttgcctcgaggtgctcctgatccgcatgatccgcgcg
ttcaaccccttgaacaacaccgtcctcttcgagggcaagttcggtgggatgcagatgttc
aaatctctcggctgtgacgacctcatcggtgccatcttcgagctggggaggaccctgtgc
cgcctgcagctgtcggatgaggagctcgccctcttcactgctgctgtcctgctctcccca
gaccgcccgtggctgactgagtccaagaaggtgcaaaagctccaggacaagatctacgtg
gccctgcagcacgagatccagaagaaacactccgccgaggacaagctctcaaagatggtt
tccaagctgcccttgatgaagaccatttgcaacctgcacttggacaagctggaatttttc
cgtctcctgcacccggagactgccatgaacttcccccccctctataaggaggttttcaac
tcggagcttcagtacagcgacccccgggagagctaa
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