KEGG   Sylvia atricapilla (blackcap): 136372079
Entry
136372079         CDS       T10263                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati04137  Mitophagy - animal
sati04144  Endocytosis
sati04145  Phagosome
sati04148  Efferocytosis
sati05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sati00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    136372079 (RAB5C)
   04145 Phagosome
    136372079 (RAB5C)
   04137 Mitophagy - animal
    136372079 (RAB5C)
   04148 Efferocytosis
    136372079 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136372079 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sati04131]
    136372079 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sati04147]
    136372079 (RAB5C)
   04031 GTP-binding proteins [BR:sati04031]
    136372079 (RAB5C)
Membrane trafficking [BR:sati04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    136372079 (RAB5C)
 Endosome - Lysosome transport
    136372079 (RAB5C)
Exosome [BR:sati04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   136372079 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   136372079 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   136372079 (RAB5C)
  Exosomal proteins of bladder cancer cells
   136372079 (RAB5C)
GTP-binding proteins [BR:sati04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    136372079 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 136372079
NCBI-ProteinID: XP_066192637
LinkDB
Position
27:complement(1821256..1833218)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccatgagtaccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacggtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcggcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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