Sylvia atricapilla (blackcap): 136372079
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Entry
136372079 CDS
T10263
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04137
Mitophagy - animal
sati04144
Endocytosis
sati04145
Phagosome
sati04148
Efferocytosis
sati05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136372079 (RAB5C)
04145 Phagosome
136372079 (RAB5C)
04137 Mitophagy - animal
136372079 (RAB5C)
04148 Efferocytosis
136372079 (RAB5C)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136372079 (RAB5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136372079 (RAB5C)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sati04147
]
136372079 (RAB5C)
04031 GTP-binding proteins [BR:
sati04031
]
136372079 (RAB5C)
Membrane trafficking [BR:
sati04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
136372079 (RAB5C)
Endosome - Lysosome transport
136372079 (RAB5C)
Exosome [BR:
sati04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136372079 (RAB5C)
Exosomal proteins of other body fluids (saliva and urine)
136372079 (RAB5C)
Exosomal proteins of colorectal cancer cells
136372079 (RAB5C)
Exosomal proteins of bladder cancer cells
136372079 (RAB5C)
GTP-binding proteins [BR:
sati04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
136372079 (RAB5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
136372079
NCBI-ProteinID:
XP_066192637
LinkDB
All DBs
Position
27:complement(1821256..1833218)
Genome browser
AA seq
216 aa
AA seq
DB search
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccatgagtaccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacggtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcggcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga
DBGET
integrated database retrieval system