Sylvia atricapilla (blackcap): 136372348
Help
Entry
136372348 CDS
T10263
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136372348 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136372348 (SMARCD2)
03036 Chromosome and associated proteins [BR:
sati03036
]
136372348 (SMARCD2)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136372348 (SMARCD2)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136372348 (SMARCD2)
PBAF complex
136372348 (SMARCD2)
GBAF(ncBAF) complex
136372348 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
136372348
NCBI-ProteinID:
XP_066193044
LinkDB
All DBs
Position
27:complement(4179993..4195106)
Genome browser
AA seq
500 aa
AA seq
DB search
MAGRGAFPLSPLPPTAAPPAPGPGTALLRGPSPAPAAAPGYRAMGPAGAQYQQRPGMSPG
GRMPMAGLQVGPPGAPPYGAATPLRPGLPQAMMDPFRKRLLTPQAQPPMATPRRGVKRRK
MADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYIS
NTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASI
MQALWLYIKHNKLQDSHEKEFINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPIIINH
TISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESINQLK
TQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAVGRHI
FAKVQQRRQELEQVLGIRLT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcgcggcgccttcccgctcagcccgctgccccccaccgccgccccgccggcc
ccggggcccggcaccgccctgctgcgcggccccagccccgcgcccgccgccgccccgggc
taccgcgccatgggcccggccggcgcgcagtaccagcagcggcccgggatgtcccccggg
ggcaggatgcccatggcagggctgcaggtgggacccccgggagcacccccctacggagca
gcgaccccgctgaggcccggcctgccccaggccatgatggatcccttcaggaagcgcctg
ctgaccccccaggcacagccacccatggccaccccgaggagaggggtgaagaggaggaag
atggctgacaaggtgctgccacagaggatccgggagctggtcccagaatcccaggcttac
atggacctgctggccttcgagcgcaagctggaccaaaccattgctcgcaagaggatggag
atccaggaggccatcaagaaacccctgacacaaaagcggaagctcaggatttacatctcc
aacaccttcaccccggccaaggaggaaggagagggcggggagcgtgtggcctcctgggag
ctccgtgtggaggggaaactgctggaggatcccagcaagcagaagaggaagttctcctcc
ttcttcaagagcctcgtgatcgagctggacaaggagctctatggaccggacaatcacctg
gtggagtggcaccggatgcccacaacccaggagactgacggcttccaggtgaagcgtcct
ggggatgtcaatgtgaagtgcaccctgctgctcatgctggaccaccagcctccccagtac
aagctggacccgaggctggcccggctcctgggggtgcacacccagaccagggccagcatc
atgcaggccctgtggctctacatcaaacacaacaaactgcaggacagccacgagaaggag
ttcatcaactgcaaccgctactttcgccagatcttcaactgtgtccgcatgcgcttctcc
gagatccccatgaagctggcggggctcctgcagcacccagaccccatcattatcaatcac
accatcagtgtggaccccaatgaccagaagaagacagcttgctatgacatcgatgtggag
gtggacgatcccctcaaagcccagatgagcaatttcctggcctccaccaccaaccagcag
gaaatcgcctccctggatgccaagatccatgagaccatcgagtccatcaaccagctgaag
acacagagggatttcatgctgagcttcagcaacaacccccaggatttcatccaggaatgg
atcaaatcccagaggagggacctcaagatcatcacggatgtgatcgggaatcccgaggag
gagcggcgggccgagttttaccaacagccctgggcgcaggaggccgtgggcagacacatc
tttgccaaggtccagcagcgccggcaggaactggaacaagtgctcgggatccgcctcact
taa
DBGET
integrated database retrieval system
