Sylvia atricapilla (blackcap): 136372661
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Entry
136372661 CDS
T10263
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136372661 (NEFM)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
136372661 (NEFM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
ATG14
ATG16
NPV_P10
Motif
Other DBs
NCBI-GeneID:
136372661
NCBI-ProteinID:
XP_066193484
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Position
28:complement(2483003..2488129)
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AA seq
823 aa
AA seq
DB search
MSYTMEPLGNPSYRRVTETRATYSRASASPSSGFRSQSWSRGSGSTVSSSYKRSNLGGPR
AAYGSTVLSSAESLDVSQSSLLNGAAELKLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQN
KEIEAELAALRQKHAGRAQLSDAYEQELRELRGALEQVSHEKAQIQLDSEHIEEDIQRLR
ERFEDEARLRDETEATIRALRKEMEEASLMRAELDKKVQSLQDEVAFLRGNHEEEVAELL
AQLQASHATVERKDYLKTDLTTALKEIRAQLECQSDHNMHQAEEWFKCRYAKLTEAAEQN
KEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNNDLSTYQDTIHQL
ENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSAFSGSITGPIFTH
RQPSVTIASTKIQKTKIEPPKLKVQHKFVEEIIEETKVEDEKSEMEDALTAIAEEMAAKA
QQEEQEEEKAEEAAEEEVSEKAPAEQEAEEEEEAEEEEEAAKSDAAEEGGSEKEEIEEKE
EGEEAEEEEEKPEAKGKAEEAPAKAEKVKTPPVKSPPKSPVTEPAKATPKEKPAEAAKEQ
KAEKAAKEEEKAAASPEKPATPKVTSPEKPATPEKAVTPEKAVTPEKAPEKAVTLEKLAP
PDKARSPEKLASPEKPRTPEKPPSPGKDAKAVVEETITVTKVTKVSAEAEKESRKEDIAV
NGEVEEKKEVESKEKEEEDKGVVTNGLDVSPVDDKAEKILVTKKVEKISGEGGDSGTTFV
TKSVTVTQKVEEHEESFEEKLVSTKKVEKVTSHAVVKEIKESE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccatggaacccctgggcaacccctcgtaccgcagggtgaccgagacccgg
gccacctacagccgcgccagcgcgtccccgtccagcggctttcgctcgcagtcgtggtcg
cggggttcgggcagcaccgtgtcctcctcctacaagcgctccaacctgggcggccctcgg
gccgcttacggctccacggtgctgagctcggccgagagcctggacgtcagccagtcctcg
ctgctcaacggcgcggccgagctcaaactgagccgctccaacgagaaggagcagctgcaa
gggctcaacgaccgcttcgccggctacatcgagaaggtgcattacctggagcagcagaac
aaggagatcgaggcggagctggcggcgctgcggcagaaacacgccgggcgggcgcagctg
agcgacgcctacgagcaggagctgcgggagctgcgcggggcgctggagcaggtgagccac
gagaaggcgcagatccagctggactcggagcacatcgaggaggacatccagcgcctgcgg
gagcgcttcgaggatgaggcgaggctccgcgacgagacggaggcgaccatccgcgccctg
cgcaaggagatggaggaggcctcgctgatgcgcgccgagctggacaagaaggtgcagtcg
ctgcaggacgaggtggccttcctgaggggcaaccacgaggaggaggtggccgagctgctg
gcgcagctgcaggcgtcgcacgccaccgtggagaggaaggactacctgaagacggacctg
acgacggcgctgaaggagatccgcgcccagctcgagtgtcagtccgaccacaacatgcac
caggccgaggagtggttcaagtgccgctacgccaagctcacggaggcggccgagcagaac
aaggaggcgatccgctccgccaaggaggagatcgccgagtaccgccggcagctgcagtcc
aagagcatcgagctggagtcggtgcgcggcaccaaggagtcgctggagaggcagctcagc
gacatcgaggagcgtcacaataacgacctcagcacttatcaggacacgattcaccagctg
gaaaacgagctcagaggaacgaagtgggaaatggctcgtcacttgcgggagtaccaggac
ctcctcaatgtcaagatggccctggacatcgaaattgctgcatacaggaagttgctggag
ggtgaggagacaagattcagtgccttctctggaagcattactggtcctatattcacacac
agacaaccatctgtcacaatagcatccaccaaaatccagaaaacaaaaatcgaaccgcca
aagctgaaggtccagcacaagtttgtagaagaaatcatcgaagagacgaaggtggaggac
gaaaagtctgagatggaagatgccctgacagccattgcagaagaaatggcagccaaggca
cagcaagaggaacaggaggaagaaaaagcagaagaagctgcagaggaagaagtttctgag
aaggctcctgcagaacaagaagctgaggaggaagaggaagcggaggaagaagaagaagct
gcaaaatccgacgccgcagaagaaggcggctctgaaaaagaagaaattgaagaaaaggaa
gaaggggaggaagctgaggaagaggaggaaaaacctgaggccaagggcaaagctgaagag
gcaccagcaaaggcagagaaggtgaaaacccctcctgtgaagtcccccccaaaatccccc
gtaacggagccggccaaggccaccccgaaggaaaaacccgcggaagcagcaaaagaacag
aaggcggagaaggcggccaaggaggaggagaaagcagcagcatccccagagaaacctgcc
acaccaaaggtgacgtccccagagaaacctgccaccccggagaaggctgtgaccccagag
aaggctgtcaccccagagaaggccccagagaaagccgtgaccctggagaagctggcgccg
ccggacaaggcgcgctccccggagaagctggccagcccagagaagcccaggacccccgag
aaacctcccagcccaggcaaggatgccaaggctgtggtggaggagaccatcacggtcacc
aaggtaacgaaagtgagcgccgaggccgagaaggagtccaggaaagaggacatcgcggtc
aacggggaggtggaggagaaaaaggaggtggaatccaaagagaaggaggaggaagacaaa
ggggtggtcactaatggcctcgacgtgagccccgtggatgataaggctgagaaaatccta
gtaaccaaaaaagtagagaaaatcagcggggagggcggggacagcgggaccacgtttgtc
accaagtcggtgacggtcactcagaaggtggaggagcacgaagaaagcttcgaggagaag
ttggtgtccaccaagaaggtggagaaagtcacttcacacgctgtggtaaaggagatcaag
gagagcgaataa
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