Sylvia atricapilla (blackcap): 136372701 Help Entry 136372701         CDS       T10263                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism sati  Sylvia atricapilla (blackcap) Pathway sati04510   Focal adhesion sati04512   ECM-receptor interaction sati04518   Integrin signaling Brite KEGG Orthology (KO) [BR:sati00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136372701 (COL2A1)    04518 Integrin signaling     136372701 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     136372701 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sati00536]     136372701 (COL2A1) Glycosaminoglycan binding proteins [BR:sati00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136372701 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  136372701 NCBI-ProteinID:  XP_066193526 LinkDB All DBs Position 29:1549737..1562278 Genome browser AA seq 1224 aa AA seqDB search MGPRGPPGPPGKPGDDVSDIRDIQPPYWRSRAEQGQKATAVPSLSLPCPQHSLHCPQGAR GFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRP GPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGAPGIAGAPGFPGPRGPPGPQ GATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPL GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLT GRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLP GAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQ GVPGEAGTPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQ GPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEK GESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAP GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSA GKDGPKGTRGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIV GLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSD GPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPA GARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPR GPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAF AGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIESIRSPEGSRKNPARTC RDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPSSIPRKNWWSSKAKE KKHIWFGETINGGFHFSYGAEDLAPNTANIQMTFLRLLSTEGSQNITYHCRNSVAYLDEE SGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRTVIEYRSQKTSRLPIV DIAPMDIGGPEQEFGVDLGPVCFL NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgggtccccgcggacctccgggacctcctggcaaacccggtgacgacgtgagtgacatt cgtgacattcagccgccatactggcgaagccgggctgagcagggacaaaaagccaccgct gtcccctctctgtcccttccctgtccccaacactcccttcactgcccgcagggcgctcgt ggcttccccgggacccccggcctgcctggagtcaaaggccaccggggctaccccggcctg gacggcgccaagggagaggcgggagcacctggagccaagggcgagtccggctcccccggc gagaacggctcccccggccccatgggtccccgcgggctgcccggagagcgaggacgcccg ggcccctcgggcgctgcgggcgctcgtggcaacgatggcctcccaggcccggccggaccc cctggtcccgtcggcccagcaggagcccccggcttccccggcgcccccggctccaagggc gctccaggcattgccggcgctccaggattccccggaccccgcggcccacccggaccccag ggagccaccggcccgctgggccccaagggacagacgggtgaacccggcatcgcgggattc aaaggcgagcagggacccaaaggagagacgggccccgcaggacctcaaggtgcccctgga ccggccggggaggaagggaagagaggagcccgtggagaacccggagctgccggacctttg gggccacctggagagaggggcgctcccggcaaccgcggcttccctgggcaggacgggctg gccggccccaagggggccccaggggagcgtggccccgctggcctggccggccccaaagga gccaccggcgaccccggacgccctggagagcctggcctgcctggagccagggggctcacg ggacgccctggggatgctgggccccaaggcaaagtcggccccacaggtgccccgggcgag gatggacgccctggaccccccggcccccagggggctcgggggcagcctggtgttatggga ttccccggtcccaaaggtgccaatggtgagcctggaaaagccggtgaaaaaggacttcct ggagcaccggggctgaggggacttcctggcaaggatggagagactggagccgctggcccc ccgggacctgccggcccggcaggggagaggggagagcaaggagcccccggcccctctggc ttccaggggctgccagggccaccaggtccccccggcgagagcggcaaacccggagatcag ggcgttcctggagaagccggaacccccgggctcgtgggtcccaggggcgagcgcggcttt cccggcgagcgcggctctccgggcgcccagggcctgcaggggccccgcggcctccccggc acccccggcaccgacggacccaagggtgccaccggccccgccggccccaacggcgcccag ggccccccggggctgcaggggatgcccggggagagaggagccgccggcatcgctggtccc aagggggacaggggagatgtcggagagaagggacccgagggagcccccggaaaggacgga gctcgcggtctgaccggtcccatcggcccccccggccccgctggccccaacggcgagaag ggcgagtccggccccccgggtccatctggagctgctggtgcccgcggtgcccccggagag cgcggagagcccggagcccccggccctgccggattcgccggacccccaggtgctgatggc caacctggagccaagggcgagcagggggagcctggccagaagggtgacgctggagccccc gggcctcaaggtccctccggggctcctggaccgcagggtcctactggtgtcactggtccc aaaggagcccggggtgctcagggacccccgggagccactggattccctggagctgccgga cgtgtcggaccccctggccccaatggtaaccccgggccccccggaccccccggctccgca ggcaaggacggccccaagggcacccgaggcgacgcgggacccccaggccgagcaggggac ccggggctgcagggccctgctggcccccctggcgagaagggcgagcccggcgaggatggc cccgcgggtccggacggtccccctggtccccaggggctagcaggacagcgtggcattgtg gggctgccaggacagcgtggagagcgtggattcccggggctgcccgggccctcgggagag ccgggaaaacagggagcacctggatctgccggtgaccggggaccccccgggcccgtggga ccccccgggctgaccgggccagccggagagcctggaagggagggaaatccaggctctgat gggcccccgggcagagatggggcagctggagtgaagggtgatcgtggtgagaccggcccc gtgggtgctcccggtgctcctggcgctcccggcgctccgggccccgtgggacccactgga aaacagggagacagaggagagacgggtgctcagggccccatgggtccatccggccctgct ggcgctcgggggatgccgggtccccaggggccacgcggtgacaaaggcgaggcgggcgaa gctggcgagcgtggcctgaaggggcaccggggcttcactgggctccaggggctgcccggg cccccgggtccttctggagaccaaggtgctgctgggcccgcaggtccctctggacccagg ggtccccccggtcccgtgggcccctcaggaaaggacggctccaatggaatgcccgggccc atcggcccccctggaccccgcgggaggagcggcgagcccggcccggcgggcccccccggg aaccccggcccacctggtccccccgggccccccggcaccggcatcgacatgtcggcgttt gcggggctggggcagcccgagaagggccccgaccccgggcgctacatgcgggcggacgag gccgcgccggggctgcggccacacgatgccgaggtggatgccaccctcaaggccctcaac aaccagatcgagagcatccgcagccctgagggctcccgcaagaacccggccaggacctgc cgagacatcaaactctgccaccccgactggaagagcggtgattactggatcgaccccaac cagggctgcaccctggacgccatcaaggtcttctgcaacatggccacgggggagacgtgc gtgtaccccagccccagcagcatccccaggaagaactggtggagcagcaaagccaaggag aagaagcacatctggttcggcgagaccatcaatggcggcttccacttcagctacggcgct gaggacctggcgcccaacacggccaacatccagatgaccttcctgaggctgctgtccacc gaaggctcccagaacatcacctaccactgccgcaacagcgtggcctacctggacgaggag tcaggcagcctgaggaaggcgctgctcatccagggctccaatgacgtggagatccgcgcc gagggcaacagcaggttcacctacagcgtgctggaggacggctgcacgaaacacaccggg aagtggggcaggactgtcattgagtatcgctcgcagaagacctcgcgcctgcccatcgtg gacattgcacctatggacattgggggacctgagcaggagtttggggttgaccttggcccc gtctgcttcttgtaa

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