Sylvia atricapilla (blackcap): 136372747
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Entry
136372747 CDS
T10263
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136372747 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136372747 (SMARCD1)
03036 Chromosome and associated proteins [BR:
sati03036
]
136372747 (SMARCD1)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136372747 (SMARCD1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136372747 (SMARCD1)
PBAF complex
136372747 (SMARCD1)
GBAF(ncBAF) complex
136372747 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
136372747
NCBI-ProteinID:
XP_066193591
LinkDB
All DBs
Position
29:1927335..1934049
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AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPMPGAAYPRPGML
PGGRMAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggttccagtcggggcctgcgagcggcggcggcgccggggccgcg
cccggggccgcactgggtccgggagcaccgggcggggcggtgcgcatgggcccggcgccg
ggacagggtctctaccgctcgccgatgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgtatggcgccgcagggcccggccatgggtcctcccgggtacggcgggagc
cccgcggtgcggcccgcgctggcgcaggccgggctggaccaggctcgtaagcggccggcg
ccgcagcagcttcagcaggtgcagcctcaggcggtgcccaaccgcaatcacaacgccaag
aagaagaagatggcagataaaatcctcccgcagaggatccgtgagctcgtgcccgaatcc
caggcctacatggacttgttggcctttgagaggaagctggaccagaccatcatgaggaag
cgcttggatatccaggaggctctgaaacgtcccatcaagcaaaagcgaaagctgcgtatt
tttatctccaacaccttcaacccagccaagtcggacgcggaggacggcgaaggaaccgtc
gcctcctgggagcttcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacaact
caggagacagatggcttccaggtgaagaggccaggggatgtgaacgtgcgctgcactgtc
ctgctgatgctggattaccagcctccccagttcaaactggatccacgcctggctcggctc
ctgggcatccacacccagacccggcccgtgatcatccaggccctgtggcagtacatcaag
acccacaagctgcaggacccccacgagcgggagttcgtcatctgtgacaagtacctgcag
cagatattcgagtcgcagcggatgaagttctctgaaatcccacaaaggcttcacgccttg
ctgatgccccctgaaccgatcatcatcaatcatgtgatcagtgttgacccaaatgaccag
aagaaaacagcctgctatgacattgacgtggaggtggacgataccctgaaaactcagatg
aattcctttctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagactatcaaccagctgaagacacagcgggagttcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtggttgggaatcccgaggaggagcgcagagccgagttctacttccag
ccgtgggcgcaggaagccgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaattggagcaggccctggggatccggaacacatag
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