Sylvia atricapilla (blackcap): 136372884
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Entry
136372884 CDS
T10263
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136372884 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
136372884
NCBI-ProteinID:
XP_066193840
LinkDB
All DBs
Position
1:152991089..153099205
Genome browser
AA seq
1768 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLSVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKGDDDEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRNEVNAAKADANPSSPNSEEKRLSSTSNRSEESHLSSSTASVECRAEERE
RGWPNGQLPDLRELDRDGRPRAQEEHKEAADQEEEDVEVEYNEPTVHFAEDTLIRSEDED
EDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEELGGCN
NNTEPREQEEAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTILRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAEHHVA
VEALRGSGSSVAMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPEGPEPAPDTQ
RFSTCLVRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILHVGDRVISIN
GVDMTEARHDQAVALLTAASPTIVLLVEREGPEQPGEGGTPHGRMHSPPPPPGPGDSPPE
ESPAPPRSQLCKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFISKVI
PRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNAQELTMVVRRDPAPPGMQEIC
IEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGMRILEVNH
QSLLGMTHTEAVQVLRAVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGRKNSLE
SISSIDRDLSPEELELLQKEMEMVREATQWEREEMEKVERMRREREAATQQLEEEAENVP
SEPLRLDYRTLAALPSSGLQRGNRAAPVGESGTGNSRRESPYSPSNPQVPAAPRAPHLAG
RETRFASISFITSQDDSKSTKPGVIQPLSRVRPGAAPHRAQEGDSPNPFQQPGPCFRIHS
SQKPSPPSPPSPDEVPINVKQAYKTFAAVPLSHPLLGTQELCGQSSSENNKMASEVAAHS
PGGQHSPEQRSFRERQKYFEIEVKQQHLDKPPKRVSLVGEDDLKKMKEEEARKLQQQRAL
LLEEEAEEDEEVRQVPEAVQSSVIIEGVEYKVERLNGRSTQAPAARPLELSENSSSQRNS
LEEGIKSEQRTNSVSGPGAALPEPAAPVRTAKAERRHQERLRMQSPELLDKDKDKEKELS
PAERRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAEAPSPAPTPS
PTPLEDCSPRNVTSPGRLSPDAADDLRHVDDRNNSVPREQDGQPEEEDTLGTRDPAAAAP
SALEDMALYSSKRKLRHSRRSLETAVPT
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctccttgcaggccgtgcccgaggagatctaccgctacagccgctcgctcgaa
gagctgctgctggacgccaaccagctccgagagctgcccaagcctttcttcaggctcctg
aacctgcgcaagctgggcctgagtgacaatgagatccagaggctgccccccgaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaatgacattccagaaattccggaa
agcatcaaattctgcaaatctctggaaatcgcagacttcagtgggaatcctctctccagg
cttcctgagggcttcacccagctccggagcctgggccacctggccttgaatgatgtgtcc
ctgcagagcctccccactgacattgggaatttggcaaacctggtgactttggagctacgt
gagaacctgctaaagactctccccacttcactctccttccttgtcaagttagagcagttg
gatctcggtggcaatgacctggaagtgctgccggacactctgggtgcactcccaaacctg
cgtgagctttggctggaccggaaccagctctcggccctgccaccagagctgggcaacctg
cgccgcctggtctgtctggatgtgtctgagaacaagctggagcagctgcccaacgaggtc
agtgggctggtggcactgacggacctgctgctgtcccagaacctgctggagtgcattccc
gatggcatcggtcagctgaagcagctctccatcctcaaggtggaccagaaccggctgaca
gacatgacagaatccattggggactgtgagaatctgtctgagctcatcctgactgagaac
atgctgacagccttgcccaagtccctggggaagctggccaagctgaccaacctgaacgtg
gaccggaaccggctgacggcgctgccggcggagatcggaggctgtgccaacctcagtgtc
ctgtccctgcgggacaaccgcctggccctgctgcccccggagctggccaacaccaccgag
ctgcacgtgctggacgtggctggcaacaggctgcagaacttgccctttgctttgacaaat
cttaatctgaaagccctctggctggcagaaaaccagtcccagcccatgctgaaattccag
accgaggatgatgaaaagacaggagaaaaggttctcacttgctacctgctcccccagcag
ccctctcccagcctggagaacctcctgcagaacagcgtggacgaaagctggacagacacc
aacctgaacagagtcagtgtgatccagttcctggatgagcctaaaggggacgatgacgag
gagtctggagctgagagacgaggcctgcagcgcagagccacccctcaccccagcgagctg
aaggtgatgaagaaggtgatcgaggtgcggcgcaatgaggtgaacgcagcaaaggctgat
gccaaccccagctcgcccaactcagaggagaagaggctgagttcaacatcgaatcgcagc
gaggagtcccacctgtccagcagcactgcctctgtggagtgcagggcagaggagagggag
cggggctggcccaacgggcagctgcctgacctgcgggagctggacagggacggcaggccc
agagcacaggaggagcacaaggaagctgctgaccaggaagaggaggatgtggaagtggag
tacaatgagcccactgtgcacttcgctgaggacacgctgatacggagtgaggatgaggat
gaggatgaagagcgaccgttcccagtggagaagcagaggctcatccgcaaggacacgccc
cattataagaaacacttcaagatcactaaactgcccaagccagaggcagtggtggcactt
ctgcaggggctgaacagtgatggggttcccaaggaggaagaggagttgggaggctgtaat
aataacacagagcccagggagcaggaggaggcatgggatgaggatgacagaaagaatgga
gctctgtctgctcagccatccgtgaagggggtgtcgtttgatcaagccaataatctgctg
attgaacctgctcgcattgaggaggaagagctgacgctgaccatcttgcggcagacgggg
gggctgggcatcagcatcgcggggggcaagggctccacgccctataagggggatgacgag
ggcatctttatttcccgtgtgtctgaggagggccctgcagctcgtgcaggggtccgtgtt
ggtgacaagcttctggaggtgaacggcgtgtccctgcactgtgccgagcaccacgtggcc
gtggaggcgctgcggggctcgggcagctccgtggccatgacggtgctgcgggagcggatg
gtggagccggagaacgccatcaccgtcaccccgctgcgccccgaggacgactacagcccc
cgggagcggcgcggggggctgcgcttccccgagggccccgagccggctccggacacacag
aggttttccacctgcctcgtgcgcaacgagaagggcctcggcttcagcatcgccgggggc
aagggctccactccgtaccgggccggggacacgggcatcttcatctcccggatcgccgag
gggggcgcagcccaccgggatgggatcctgcacgtcggagaccgggtcatctcgatcaat
ggggtagacatgacagaagccaggcatgatcaggccgtagcgctgcttaccgcggcctcc
cccaccatcgtgctgctggtcgagagagagggcccggagcagcccggcgaggggggcacg
ccccacggccgcatgcactcccccccgccgccccccgggcccggggacagccctcccgag
gagagccctgcgccgccccggagccagctctgcaagggcctggaggatcagtaccccatc
gaggaaattcacctggtgaaagcaggtggtcccctgggcctcagcatcgttggaggcagt
gaccattccagtcatccctttgggattcatgagccaggtgtcttcatctccaaggtgatc
ccgcgggggctggcgtcgcgcagcgggctccgcgtgggggacaggatcctggaggtgaac
agcatcgacctgcgccacgccacgcaccaggaggccgtcaacgccctgctctccaacgcc
caggagctcaccatggtggtccgcagggacccagccccacctggcatgcaggaaatatgc
attgaaaaggctccaggagagaagctgggcatcagcatccgaggtggagcaaagggccat
gctggcaatccgtttgatcccactgatgaaggcatcttcatctccaaggtgagctcctcg
ggggccgcagcccgggacgggcggctgaaggtggggatgaggatcctggaggtgaaccac
cagagcctgctgggcatgacacacacggaggccgtgcaggtgctgcgggccgtgggcgac
gcgctgctcgtgctggtctgcgacggcttcgaccccaaggctgcggctgccatcgagatg
tccccaggcatcattgcaaacccttttgctgctggcattgggcgcaagaacagcctggag
agcatctcctccatcgaccgggacctgagccccgaggagctggagctcctgcagaaggag
atggaaatggtgagagaagccactcagtgggagagagaagaaatggagaaagtggagcgg
atgcgtagggagcgggaggcagccacgcagcagcttgaggaggaggcggagaacgtgccc
agtgaacccctgcgcctggactaccggaccctggcagcgctgcccagcagtggcctgcag
agaggcaaccgtgctgctcccgtgggcgagtctgggacaggaaattccaggcgtgaatcc
ccctattctcccagtaatccacaggtgcccgcagccccccgggcccctcacctggccggc
agggagacgcgctttgcttccattagcttcattacgtcgcaggatgacagtaaatcaacc
aagcctggcgtcattcagcctctctcccgcgtgcgaccaggcgccgcgccgcacagggcc
caggagggggacagccccaaccccttccagcagcctgggccgtgcttcaggatccacagc
tctcaaaagccatcgccaccgtcgccaccctcccctgacgaggtccccatcaatgtcaag
caggcctacaagaccttcgcagcagtgcccctgtcccacccactgctcgggacacaggaa
ttgtgtggtcagagcagctcagaaaacaacaaaatggcctcagaggtggccgcacacagc
cctggtggacagcacagccctgagcaaaggtccttccgtgagaggcagaagtattttgag
attgaggtgaagcagcagcacctggacaagcctcccaagcgtgtgtccttggtgggggag
gatgacctgaagaaaatgaaagaagaggaagcccgcaagctgcagcagcagcgagctctt
ctgctggaggaggaagctgaggaggatgaggaggtgaggcaggtgcccgaggctgtgcag
tccagcgtcatcatcgagggcgtggagtacaaggtggagaggctcaatggaaggagcacc
caggctccagcagctcggcctttggagctcagtgagaacagcagctcacagaggaattcc
ctggaagaggggatcaaatctgagcagagaaccaactctgtgtcggggccgggcgcggcg
ctgccggagcccgcggcccccgtgcgcacggccaaggccgagcggcggcaccaggagcgg
ctgcggatgcagagccccgagctgctggacaaggacaaggacaaggagaaggagctgtcc
ccggcggagcgccgtgccctggaggccgagaaacgggccatgtggagggcggcacggatg
aagtcgctggaacaggacgctcttaaggcccagatggtgattgccaagtccaaggagggg
aagaagcgcagcacgctggagcagctggcagaggccccgtcccctgctccgacgccgtct
ccaacgccgctggaagattgcagccccaggaacgtcacgtccccgggaaggctgtcgcct
gatgcagctgatgacctcagacacgtcgatgacaggaataactcagttccccgggagcag
gatgggcagccagaggaggaggacacactgggaacacgggatccagcagcagcagccccc
tcagccctggaggacatggccctgtacagcagcaagcggaagctccggcacagccggcgc
agtttggagaccgctgtccccacatag
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integrated database retrieval system
