Sylvia atricapilla (blackcap): 136373096
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Entry
136373096 CDS
T10263
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136373096 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136373096 (PHF1)
03036 Chromosome and associated proteins [BR:
sati03036
]
136373096 (PHF1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
136373096 (PHF1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
136373096 (PHF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCL_mid
Tudor_2
PHD
Mtf2_C
PHD_2
PHD_ash2p_like
ASH2L-like_WH
C1_1
DUF4537
SH3_TNRC18
ISC10_helical
PHD_UBR7-like
Motif
Other DBs
NCBI-GeneID:
136373096
NCBI-ProteinID:
XP_066194133
LinkDB
All DBs
Position
31:494775..509816
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AA seq
478 aa
AA seq
DB search
MAAAGGRGSPPQSPPKPPQIGEGQDVLARWTDGLLYLGVVKKVDAPRRGCLIQFEDNSQF
FVLWKDISPAAVPGDEPSCCVCAGSSRNAENSLVRCGKCGHAYHQRCHVPPPPAGAGPWS
CRRCVFAVATKRGGALRRGPQARAMLRMKSVLPYALGALDWDPPHLHNLQHCYCYCGGPG
HWNLKMLQCCQCWQWFHEACTQCLSKPLLYGDRFYVFECSVCRGGAESVRRLPLRWVDVA
HLLLYHLSVCCKKKYFDLEREILPFANSNWEALLLGQLSATPKAERYGRLLGALSTHKDR
FVSGREMKKRKGLFGLHSRAPPPLPPGLLRGPPGTRTDPKKTPPKNPPNPPDFLGKSPKS
ALNFGVPPRAPPGGSYNFRRTEARGPPSPPIRMFASFHPSANTSPSSPTPDPEPSPPHER
RRPLPQPTEAPPPSSTPPSSTPLSATPPSATPPRVLARRVTLDGTVQYLLEWGGGAML
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccggggggcgggggtcgcccccccagagccccccgaagcccccccagatc
ggggaggggcaggacgtgctggcgcgctggaccgacgggctgctctacctgggcgtcgtc
aagaaggtggacgcccctcgccggggctgcctcatccagttcgaggacaattcccaattc
ttcgtgctctggaaagacatcagccccgcggccgtgcccggggacgagccctcgtgctgc
gtctgtgccgggagttcccgaaatgccgaaaattcgctcgtgcgatgcgggaagtgcggc
cacgcataccaccagcgctgccacgtgccccctcccccggctggtgccgggccctggagc
tgccgccgctgcgtcttcgccgtggccaccaagcgcgggggcgctctccggcgcgggccg
caggcacgggccatgctgcggatgaagtcggtgctgccgtacgcgctgggggcgctggac
tgggacccgccgcacctgcacaacctgcagcactgctactgctactgcggggggcccggg
cactggaacctgaagatgctgcagtgctgccagtgctggcagtggttccacgaggcgtgc
actcagtgcctgtccaagccgctgctctacggggacaggttttatgtcttcgagtgcagt
gtgtgccggggcggggccgagagtgtgcggagactgcccctgcgctgggtggacgtggct
cacctgctcctttaccacctcagcgtttgctgcaagaagaaatattttgacctggagcga
gaaattctcccgttcgccaactccaactgggaggcgctgctgctgggccagctctcggcc
acgcccaaggcggagcgctacgggcgcctcctgggggcgctcagcacccacaaggaccgg
tttgtctcgggccgggagatgaagaagcgcaaggggctcttcgggctgcacagccgcgcc
cctccgccactgccccccgggctcctgcggggtccgcccggaaccagaaccgaccccaaa
aaaacaccccccaaaaaccccccaaaccccccagattttttggggaaaagccccaaatct
gccctaaattttggggtcccccccagggccccccccggcggctcctacaacttccggaga
accgaggcccggggaccccccagcccccccatccggatgttcgcctccttccacccctcg
gccaacaccagcccaagctcacctacgccggacccggagccctcccctccccacgagcgc
cgccggcccctcccccaacccacagaggccccgcccccttcgtccacgcccccttcatcc
acacccctttcagccacgcccccctcggccacgcccccccgtgtcctggcgcgccgggtg
accctggacgggaccgttcagtacctgctggagtggggaggcggggccatgctctga
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