Sylvia atricapilla (blackcap): 136373145
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Entry
136373145 CDS
T10263
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
sati04145
Phagosome
sati05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136373145
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136373145
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136373145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136373145
Enzymes [BR:
sati01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
136373145
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
136373145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_22
AAA_15
SMC_N
HopA1
AAA_23
Motif
Other DBs
NCBI-GeneID:
136373145
NCBI-ProteinID:
XP_066194180
LinkDB
All DBs
Position
32:complement(73462..80966)
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AA seq
724 aa
AA seq
DB search
MALLSAGLLPGLLLVADALALVLLVPLVPVLAPLGLVGVWLESALRLPVLVVATWLLSPR
RPSGATANAVTVAATPAAFGTFRHVLGSPGAGPGLLAAASPAWVGVTHAAAALALLAWAA
PPTSSGVSETSGDVPKAPGTVWRALALTWEERKVLGAALLCLVLAAIGETLGPYVTGKVL
DAIGGGDGLTTGAICMVVAAGATRVLFSGCRGGFFLLLKARLHQSLSLRLFSHLVHQDLD
FFQGVPAAELLAQFSMEVPRVCMAIPSGANQLFRSLGMALVVGTFMMGLAPGLALLALLE
LPLEIATHRIQSARKQILQQSMLEASARTASGVQESVAAIETIRIFSAEEEEEKQHSWNL
AKELRLKQRIELELAFFTLIHRLLQLAIRVLVLFRSHQLLHDGYITPGVLVTFLLYQDTV
GSHVQVLLYGFNQFLTNAAAGQKIWEYLDRVPTGDVRGTREPPELQGHVTFQKVSFTYPG
NPEHPVLKDVTFEVRSGEVTALVGHNGSGKSTAVALLERLRDPGSGSVLLDGIPLPEYEH
QYLHRKVVLVEQDPVLFSGTIRENVALGLERCKESELREAATAAGAMDFIQGLEQGWDTE
VGEHGGRLAAGERRCVALARALLRRPAVLILDEALDDGDEGAAQRWLRTGLAQTVLVVSH
RPRVLDMADRLVVLERGAVVETGTPAELRERCGAYSHLLLGGDKTGCPEAPSMGSEKGAA
SGGE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttgtccgctggtctcctgcccgggcttctgctggtggccgatgccctggca
ctggtgttacttgtgccgctggtgccggtgctggctccgctgggcctggtgggcgtgtgg
ctcgagtctgccctacgcctgccagtcctggtcgtggccacctggctgctgtccccacgc
cgtccctctggggccacggcgaacgccgtcacggtcgccgccacccctgcggccttcgga
acattccggcacgtcctggggtcgcccggggctgggccagggctgttggcggccgcctcg
cccgcctgggtcggggtcacccacgcagctgccgcactggccttgctggcctgggccgcg
cccccgacctccagcggtgtctctgagacctccggcgacgttcccaaggctcctggcact
gtctggcgcgctctggcactgacctgggaggagcggaaggtcctcggagctgccttactc
tgcctcgtgttggcggccattggggagacattgggaccgtacgttactgggaaggtgctg
gatgccatcggtggtggggatggactcaccacaggagccatctgcatggtggtagctgct
ggagccaccagggtgctgttttctgggtgccgtggggggttcttcctgctgttgaaggca
cgtctccatcagagcctgagtctccggctcttctcccacctggtgcaccaagatctggac
ttctttcagggagtgccagcagctgagctgttggctcagttttccatggaagtgccacgg
gtgtgcatggcgataccatctggagccaaccagctgttccgaagcctgggaatggccctg
gtggtggggacattcatgatggggctggcaccggggctggcactgctggcactgctggag
ctgccccttgaaatcgccacccaccgcatccagtctgcccggaaacagatactgcagcaa
tccatgctggaagcatctgcccggacagcctcaggggtgcaggaatctgtcgccgctatt
gagacaatccgtatcttttcggcggaggaggaagaggagaagcagcacagctggaacctg
gccaaggagctgaggctgaagcagaggatagagctggagctggcattcttcacccttatc
cataggttgctccagctggccatccgggttctagtgctcttccggagccaccaactgctc
catgatggatacatcactcctggggtcctcgtcacgttcctgctgtaccaggacacagtt
ggaagccatgtccaggtgctgctctatggcttcaatcaattcctgaccaatgcagctgcc
ggacagaagatctgggaatacctggatcgggtacccacaggggatgtcagggggacacga
gaaccccctgagcttcagggccatgtcacttttcagaaggtctccttcacatatcctggg
aatccagagcaccctgtgctgaaggatgtaaccttcgaggtgcgttccggggaggtgaca
gcactggtggggcacaatggaagcgggaagagcacggctgtggcactgctggagcggctg
cgggatcctgggagtgggagcgtgctgctggatgggatcccgctgccagaatatgaacac
cagtacctgcaccgaaaggtggtgctggtggagcaggatcccgtcctgttttctggaacc
atccgtgaaaacgtcgcactggggctggagcgctgcaaagagtcggagctgcgggaggct
gccactgctgctggagccatggacttcatccaggggctggagcagggctgggacactgag
gtgggggaacatggagggcggctggcagcaggggagcggcgctgtgtggccctggcccgg
gctctgctccggcgtccggccgtcctcatcctcgatgaggcactggatgatggagacgag
ggggcggcacagcgctggttgcgcactgggctggcccagaccgtgctggtcgtgtcccac
cggccgcgggtgctggatatggccgatcgcctcgtggtgttggaacgtggagctgtggtg
gagactggaacaccagcggagctgcgggaacgctgcggggcctacagccacctgctcctt
ggaggagacaagactgggtgccctgaggcccccagcatgggcagtgagaagggggctgca
tctggcggggaataa
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