Sylvia atricapilla (blackcap): 136373485
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Entry
136373485 CDS
T10263
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136373485 (TAF1C)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
136373485 (TAF1C)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
136373485
NCBI-ProteinID:
XP_066194473
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All DBs
Position
Z:68188554..68192997
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AA seq
934 aa
AA seq
DB search
MEFPAALFPSYFGAGPPQEEGGPAPLAGWGEHGQVLEGGPGRRQVQPAFVPRRGATGERW
EAADAAAVPVLLPRAGCWIPSPAPQDILYRSGLCKKLRAGKSRAILDFTRQLGHFFVDHP
EDAFGSLGRLLHKNFYLGNSKLQRPARSSTIRMTALVEDIDRLEARRGCPRQHLASRLRW
FSHLCRDWLFEVPLGLLADCLHEELMQQWSNLLFDDSLTGGALAWLPPEDRGTPVGCLVH
PGGQAMNHLYFQDVVLEELPRTRGAPAQFELSGRIQQVAAARVDGQDFVGVRSDYHCGVW
RLLGKRGAVPTPLQVIHTDVPASCLTVSPHLPGELSVCTQSGTVYLWSVETGLQQLRHDP
QTMFFRDHSPWRWSDFTAHPRVLSCADRTGLQCLDARAPKRCHFDLFKVGEEAGCQQGER
VVLPMYLGRAHPSQYLVTTQFSVYVLDERLPLVPVLKWAHMMKAPPLFAHLMPGKPGRSH
KVLLGASRTQELLLLQYRGGSQSACQLAGTPQKLHSIAGCLQHLPTQLPHRHHLLQQRLT
APAAGLAATLQEDGLHKSMLIFQLSEAGDVFCQRLTHNAAQPPAPPSRDEATTAPGSSPL
FEVPASSPQGLAGEEEEEEEQTFYLSNLEVIIDDEEEDMGTSAPLEEAELLQERCANPQP
SPAVPSPAAALQYRRWLRALSRACKEPPGHTWSPSLSQRRLFTRKDLEGPVGPSSLQRQM
RQRLRQTMKEGGLIQHWAPLALQPPPLPQALEPAGGLDPLSARLTAAWAGDWEQWWEERT
SFSVAKRQQALRERRRRQKRAQGRRSLSASFTSSLTYQSELSELSDTGPSVLSPGRPPLL
SQEASPPAGSPLVHSPATSAAPDEALLSSQSLRCRGIPKERRKTLRDYLSVWAEGPPEPP
EPLGSQASQLCIPSSQSQLSSASQPRRKRPRMGF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccggccgcgctcttcccctcctacttcggcgctggcccgccgcaggaagaa
ggtggccccgcgccgctcgccggctggggcgagcacgggcaagtgctggagggtggcccc
ggacgccgccaggtgcagccggcgttcgtgccccgccgcggcgcgacgggcgaaaggtgg
gaagccgccgacgctgcggccgttccggtgctgctgcccagagcgggctgctggatcccc
tcgcccgcacctcaggatatcctgtaccgcagcggcctgtgcaagaagcttcgagcaggc
aagtccagagccattctggacttcaccaggcagctgggccatttctttgtggatcaccca
gaagatgcttttggctccctggggcgtctgctgcacaagaacttctacctcggaaactcc
aagctgcagagaccagcccgaagtagtaccatccggatgacggccctggtggaggacatt
gaccgcctggaggcccgacgtggctgcccccggcagcacttagcctcccgcctacgctgg
ttctcccacctctgccgtgactggctcttcgaggtgccactggggctgctggcagactgc
ctgcatgaggagctgatgcagcagtggtccaacctgctctttgatgacagcctcactggg
ggggcactggcctggttgccccctgaagacagggggacacctgtgggctgcctggtgcac
cctggagggcaggccatgaaccacctctatttccaggatgtggtgctggaggagctgccc
cgcacccggggcgccccagcgcagtttgagctcagtgggcgcatccagcaagtggctgca
gcccgtgtggatgggcaagattttgttggggtccgctcagactatcactgtggtgtttgg
aggctgctgggcaaaagaggggcagttcccaccccactacaggtgatccacactgatgtg
cctgcctcctgcctcactgtcagccctcaccttcctggggagttgtctgtctgcacccag
agtgggactgtctacctctggagcgtcgagactgggctgcagcagctccgccatgacccc
cagaccatgttttttcgggaccattcaccctggcgctggagtgatttcactgcccaccca
agggtgctcagctgtgctgaccgcacgggcctgcagtgcctggatgcccgggcccccaag
agatgccactttgacttgttcaaggtgggcgaggaagctggctgccagcagggcgagcgt
gtcgtcctgcccatgtatctgggcagggcgcacccctcacaataccttgtcaccacccag
ttctctgtgtatgtgctggatgagcggttgccattggtgcctgttctgaagtgggcacac
atgatgaaggcccctccactctttgcgcacctgatgccagggaaacccgggaggagccac
aaggtgctgcttggggcatcccgtacccaggagctgttgctgttgcaataccgggggggc
agccagtcagcttgtcagctggcagggactccacagaagctgcacagtattgcagggtgc
ctgcagcacctgcccacccagctcccacaccgccaccacctgcttcagcagcgcctcaca
gccccagcagcagggctggctgccacactgcaagaggatggactgcacaagtccatgttg
attttccagctctctgaggctggggatgtcttctgccagaggctgacccacaacgcagca
cagccccctgcacccccatcgagggatgaggctacaacagctcctggctcttcacctctc
ttcgaggtaccagccagcagcccacagggcttggctggtgaggaagaagaggaggaagag
caaacattttacttgtccaacctggaggtgattattgatgatgaggaggaggacatgggc
acatcagcacccctggaggaagctgaactcctgcaggagcgatgtgccaaccctcagccc
tccccagcagtgcccagcccagctgcagccctgcagtaccgccgctggctgagggccctt
tccagggcttgcaaggagcctccggggcacacttggtcccccagtctcagccagaggcgg
ctcttcacccgcaaagatctggaggggccagtaggccccagcagcctgcagaggcagatg
cgtcagcggctgcgccaaaccatgaaagaagggggcctcatccagcattgggcacctttg
gccctccagccccctcccctgccacaggccctggaaccagcagggggtctggacccacta
agtgcccgtctgacagcagcttgggctggggactgggagcagtggtgggaggagaggacg
agcttcagtgtggcgaagagacagcaggcgctgcgggagcggcggcggcggcagaagcga
gcccagggccgccgcagcctttcagctagcttcacctcctctctcacctaccagtctgag
ctgtccgagctgagtgacacaggcccctcggtgctctcccccggccgcccacctcttctc
tcccaggaggcctccccaccagcaggcagccccctggttcatagccccgcaacctcagca
gcacccgatgaagccctgctctcttcacagagcctgcgctgccgcggcatccccaaggag
cggcggaaaacgttgcgggactacctatctgtgtgggccgagggcccccccgagccccca
gaaccccttggcagccaggccagccagctatgcatcccatcttcgcagagccagctgtcc
tccgcctcacaaccccgccgtaagcgcccccgaatgggtttctga
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