Sylvia atricapilla (blackcap): 136373497
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Entry
136373497 CDS
T10263
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sati00535
]
136373497
Proteoglycans [BR:
sati00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
136373497
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
136373497
NCBI-ProteinID:
XP_066194500
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Position
Z:complement(9226933..9228219)
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AA seq
428 aa
AA seq
DB search
MFFLVIFIFTCAAKAGLSLNVSNPCPSMCKCTPEETILCNRAGLKTLPGEIAASTISLNL
SNNYLRILNTNTFRNLTFLHSLWLDGNNLTFLTPGTFHALSRLQELHLSRNSRLTYLHAN
TFRGLLNLISLDLSHCNIFEIHPLLFSHLPSLERLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLEALYDLNLRKNRIWIIQNGAFAKLLRLGMLNLGHNFITDLPNQL
FEGLIQLKTMHLEANRITAVDCTFRGLLNLRNLYLNNNQISSISNSAFSYLNKLHFLHLS
RNNLSSLPVRLFAEVTKLKYVFLSHNPWRCDCSLLWFWRWTAARRAVIEGLDCAFPGPPN
TTAPEQPRPGDLGDCTLPLELATEDKCRVAGTSVAPKPPALPGQLILLALACHTWYNERG
WGTVVATF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttctttctcgttatatttatatttacttgtgcagcaaaggctgggctgagtctgaat
gtctccaatccatgcccaagcatgtgcaaatgtacacctgaagagaccatcctctgcaac
agagccggactgaaaaccctgcctggagaaatagcagcatccacaatctctctaaacctc
tccaacaattatttgcggattctgaacaccaataccttcagaaacctgactttccttcac
agcctctggctagatgggaacaatctgactttcctgaccccaggaactttccacgctctc
agcaggctgcaagagctgcacctcagcaggaactcacgcctcacctacctgcacgcaaac
actttcagaggactattaaacctcatcagcctggatttgtcccactgcaatatcttcgaa
atccacccacttctattttcacacttgccttctttagaaaggcttgatttagcctccaat
aacatgcggtatgtcccacaagcctttaggaacctgtccagcctcacgcggctgtccctg
gaaggcaatcacatagaagccatcggcagagattccctgaaggacctggaagccctgtac
gatctgaatctcaggaagaatcggatatggatcattcaaaatggagctttcgcaaagctt
ctcagattgggcatgttaaatttaggacacaacttcatcactgatttgcctaatcagctt
tttgaaggattgatccagctcaagactatgcacctcgaagccaacagaatcactgctgtc
gactgcaccttccgagggctgctcaacctgagaaacttgtacctgaacaacaaccagatc
tcctccatctccaactccgccttttcgtacctaaacaagctgcacttccttcacctgagc
aggaacaacctcagctccctgcccgtgcgcctgttcgccgaagtgaccaagctgaagtac
gtgttcctgtcccacaacccctggaggtgtgactgcagcttgctctggttctggcgctgg
acagccgcacgccgcgccgtcatcgaggggctggactgcgccttccccggccctcccaac
acaacagcaccagagcagccccgccctggggacctgggggactgcaccctgccactggag
ctggccactgaagacaagtgcagggtggctgggaccagcgtggctcccaagcccccagcc
ctgcccggccagctcatcctgctggcactggcctgccacacatggtacaacgagagggga
tggggcaccgtggtggccacgttttaa
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