Sylvia atricapilla (blackcap): 136373585
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Entry
136373585 CDS
T10263
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136373585 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136373585 (DMXL1)
Membrane trafficking [BR:
sati04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136373585 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
136373585 (DMXL1)
RAVE complex
136373585 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
136373585
NCBI-ProteinID:
XP_066194599
LinkDB
All DBs
Position
Z:complement(27714102..27790016)
Genome browser
AA seq
3059 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGSLHDQPFTAYASGCDIVILGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGKVICIFEPVSILKQNSSHHNVLHYQWQKNAQISLEAVVHNLTW
DPTGTRLLTGSSCLQLWSSVSLENSADSDSTERTGVELGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNAENWRSAITPPAASPENQAKELDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAANFTNNFKRN
ISSKEKVQSALELNLRPFRRGRRRSGAIVAHTGYSLHQQDPHEAHRNIPPHANALCHFHI
AASINPATDIPLLPSITSLSLGESEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKRNFEH
HSPETNTEDSNQMDGRSEEEADVNGDQQKGNQEKKELSDEKAAPYSSLVPLSSALFDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPNVEKAIQANDFFKYQESPVRSQSRGKANVPSQDPNVVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
NNQEKKMPSKKNSLSDSGNQQNGFSEKFYLIVMEYTQNHSLLHMWHLHLKAIPVSIDEKI
GSNPPEEATQTEESYSSPDPEKIQSPFTQKYRACRANLQSTSWLTLSSKMVYSQELTMPE
GVDIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVESPMSSMSQDGTDSD
FKYIWEEWPLLIEDGLPSSSAINVPGRPTDVSCAHTNRLAVAYKQAASRNSHLSEDFVMH
VSIFECESTGGSSWILEQTLNLDEIGTMLDSSVSVGSDLGADNQQDTSVSHGESIIPNTK
HLVHLDWMSREDGSHILTVGIGSKLFMFGQLSGKRQEQNGNETVAISHSGNPKAATLSGF
VLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVSTDSYSG
SMPCITSLMKQSQSAASDLHPPKRTLTRSMTSLAQKLSGKRSASDLSVEMEDSGLFEAAH
TLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESESNHDKRHRSLTI
SASGSTARDPKMFSKTETADYIEIDSVPPLPLYALLAADDDSSYSCSEKSNNQNSQNKKG
MPNDSYENLFQNTVISTDDLVTFEADEDISKPKVIDLSQYSPTYFGPEHAQVLSRHLLHS
SLPGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVQLHTFLTTA
LPPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGIGWWVRNI
HSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDAKMTQFFGNNFTED
RWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYESEF
EVSSTYKSVLQKRVLGDVSTGKESSGNIHCDPFLRSMAYWILEDYGKALDTLIKHSIEDE
GDEGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLGERR
LFFTTAYAHLKAGCPMLALEVLSKMPKVVKRSKSFCKSPSLVDSGKDFSPYSPAKEFETK
DQASSIDWSQPVFNGCSSSDCSSGKHSSSTLSFDWSQPSALFEDQQLQLQSDSDENDESE
DSSLVMKELKPLKKTEKFHETSSSYTESSSVVDDQDILSPSEDIISAQLKFRACLKILTV
ELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYGIEVEEIQSGVTGMPDEATLHEN
TEDLSDQEKAMLQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQ
ESQQEQSVQIPSSPSPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLDSPP
HPDTQNSKIYVMHTLAASLSACIYQCLCDGHSYSSFQGNQFTGTVYQTVLLTQRHSLQTT
NLEETVTPNTSPAQWPGMMALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHS
SNELYRIMAHPLNNKMWSAVFGGGAHVPSRGQQQLKTKTEDGEKQQKHYRLSSKTSPKEN
SQLPALPLVDQQSSSYKERFIPPELSIWDYFIAKPLLPLQSRVEYDSEESQESDEDDEDN
DGDVFASNSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHA
VLKTLQRWEQVLLRRLELYGGPPQHYISVHASEGALAAGPALLRHKTLLEPTNTPFSSSS
RVALSVKRLWQYLVKQEEVQETFIRNIFTKKRCLNESLVEHSETMKDSVVEEPVINKIET
DLGYLGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSAILATQIYTWVDDDV
EIENKGADDFLVIHARDDLINVQGSTPYTHSNPGTPINMPWLGSTQTGRGASVEYSNKFN
GIRKELARKEMLKKAINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNS
RVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVFIS
SSSLIATAGFSSDNRNICLWDTLVSPTNSLVHAFICHDSGATVLAYAPKHQLLISGGRKG
FTCVIDLRLKQQQQLLQSHDSPVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTFIN
EHARQSLFRNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRFSPLKDVLKNDVKFMI
NT seq
9180 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtcaaccccggggacagctgcttctccgtg
ggcagcctgcatgaccagcccttcacggcatacgcatcaggatgtgacattgtgatactg
gggactgactttgaaagattacagataatccctggagcaaaacatggaaacattcaagtg
ggatgtgtggactgttcaatgcaacaggggaagattgcagcttcttatggaaaggtgatt
tgtatctttgagccagttagcatcttgaagcagaacagcagtcatcataatgtgttgcat
taccaatggcagaagaatgctcaaatctcactggaagctgtagtacataatctaacatgg
gatcccacaggtactcgccttctgactggttccagttgtcttcaactttggtccagtgtt
tctttggaaaactctgctgacagtgacagtactgaaagaacaggtgttgaacttggagag
tggagatgtatctggcagtgcaaaactgcttctcaagtttgtttaatgaaattctcacca
gatggggagttttttgctactgctggaaaggatgactgtcttgtgaaagtatggtacaat
gcagaaaactggcggtcagccataacaccaccagctgccagtccagagaaccaagcaaaa
gaacttgatttttcatttgtttatttggctcatccgagatcagtaaatgcattttcgtgg
agaaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagtctgttgtat
gggggaggatacagcaattggagtgaagcagcgaacttcacaaataacttcaagagaaat
atttcaagtaaagaaaaagtgcagagtgcattagagttaaacctgaggcccttccgacgg
ggaaggaggaggtcaggtgctattgtagcacatactggatattctctgcatcagcaagat
cctcatgaagctcacaggaacattcctcctcatgcaaatgccctttgccacttccatatt
gctgccagtatcaatccagccacagatattcctctgctgccttctatcacatctctaagt
cttggtgaaagtgaagaaaaaagcggaccttttgttgtacactggctaaacaacaaagaa
cttcattttactttatctatggaagtgtttttgcaacaacttaaaagaaattttgaacat
cattctcctgagactaatactgaggattctaatcaaatggacggcagatcagaagaagag
gctgatgtgaatggagatcaacaaaaaggaaaccaagagaagaaggaactgagtgatgag
aaagccgctccatattcaagccttgttcctttatcctctgctctttttgatcacgaaatt
gaagttctgctttctgaatggagtaaaaatgctgacatgctcttcagtatacatcctatg
gatggctccctgctggtgtggcatgtagactggctagatgaataccagcctggcatgttt
cgccaggtgcaggtgtcatttgtctcaagaattcctgttgcatttccaacaggtgatgca
aactctctttgcagaagtatagtgatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttct
ggtcacagtaaatcaaccaacagcttaaagctaagtatcttcacacctaatgttatgatg
atttccaaacatgcagatggatcactgaaccagtggctagtgagttttgctgaagaatct
gctttttcaactgtactcagtatttcacacaaatcccgatattgtggtcatcgttttcat
cttaacgacttggcttgccattcagtgttaccactactgcttacaacctcacatcacaat
gctctaatttcaccaaatgttgagaaagcaatacaggcaaatgatttttttaagtatcag
gagtcaccagtaagatctcagagtagaggcaaagcaaatgtgccatcccaggatcccaat
gtggtttacagtgaacttattctttggagagtcgatcctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattctcttcatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctattgccttggtgcatactgtaattctccaagt
gcctgctttgtggctagtgacggacagcatttaagattatatcaagctgtaatagatgct
aagaaacttctgtgtgagctctccaatccagaaatttctaagtatgttggtgaagttttt
aacatcataagtcagcaatctaccgctcgcccgggatgtattattgagctggatgccatc
acagagcttcatggccggaaaacacagttattccatgtttttcaagaagactttatttta
aataaccaggagaagaaaatgccttcaaagaagaacagtttatcagactctggaaaccag
cagaatggattctctgaaaaattctacttaatagtgatggagtatacacaaaaccattca
ttactacatatgtggcatttacatttgaaggcaattcctgtctcgatagatgaaaagata
ggttcaaatccacctgaagaagcaacacaaacagaagaatcatattcttcaccagatcca
gagaagatccaatcacctttcactcaaaagtatcgagcctgtagagcaaaccttcagagc
accagctggcttactctgtcttccaaaatggtctatagtcaagagttgactatgccagaa
ggagtagacataataagcgtaaagccatcagcagggcatctcagttcttcttccatatat
cctgtttgtcgtgcaccttatctgctggctacttcctgctctgatggaaaagttcgattc
tggagatgcagggttgaatcaccaatgtcttccatgtcacaagatggtacagacagtgat
tttaaatatatatgggaagaatggccattactgattgaggatggacttcctagtagtagt
gctattaatgttccagggaggccaactgacgtcagctgtgcacacacaaacagattagcg
gtagcatacaagcaggcagcatctagaaatagccatctttctgaagattttgtgatgcat
gttagtatttttgaatgtgaatctacagggggttcttcttggattttagaacagacactt
aatttagatgagataggcaccatgttggactctagtgttagtgtgggtagtgatttaggg
gcagacaaccaacaagacacttctgtgtctcatggtgagagtattatacccaacactaag
cacttggtacacttagactggatgtctagggaagatggttcgcatattctgacagtgggt
attggatcaaaactttttatgtttggtcagctgtctgggaagaggcaagaacaaaatggt
aacgagactgtagcaatctcacacagtggaaatcctaaggctgcaaccctttctgggttt
gttttgctgcgttgtgttgacttagtttcatctgtggaggggtcacctccttttcctgta
tccttgtcttgggttcgtgatggcattctggtagttggaatggattgtgaaatgcatgtt
tattctcagtggcaatctccttctaagcaggaactagttagcacagattcctacagtgga
agtatgccatgcataactagcttaatgaaacaaagccagtcagctgcctcagatctgcat
ccaccaaagagaaccttgaccagatctatgaccagccttgcacagaaacttagtgggaaa
aggtctgcctctgatctgtctgtggaaatggaagattctggtctttttgaagcagctcat
acattatctccaactttgcctcagtaccatccgtatcaactgttggaactcatggatctt
ggtaaagtacgcagagcaaaagccattctgtcccatttggtgaagtgcattgctggagaa
gttgttgctataaatgagtctgagtctaatcatgacaagaggcacagatctctgacgatc
agtgctagtggaagtactgcaagagatcccaaaatgttcagcaaaacagagactgcagac
tatatcgaaatagactctgttccaccattgcctctgtatgctctgcttgctgcggatgat
gattcatcttattcctgttcagagaaatccaataatcagaatagtcaaaataaaaagggt
atgcccaatgacagttatgaaaatctcttccaaaatactgttataagtacagatgacctt
gtcacatttgaggcagatgaagacatttcaaaaccaaaagtcatcgatctttctcaatac
agcccaacttattttggaccagaacatgctcaagttctgtctcgtcacttgcttcattca
agcttgccaggtctgactaggatggagcaaatgtcattgatggccttggcagatacaatt
gctactaccagtactgacattggagaaagcagagacagaagtcaaggtggagaaactctt
gatgagtgtggtttaaaatttttattggctgtccagcttcacacctttctgacaactgca
cttcctcctgtgcatcgagcccagctgcttcaccaaggcttatctactagtcattttgcc
tgggcattccattctgtagcagaggaagaactcctgagtatgctccctgcagtgcagaag
ggagatccaacatggtcagagctcagagctatggggataggatggtgggttcgaaacatc
cacagcctgcggaaatgcatagaaaaggtggctaaagcggctttccaacgaaacaacgat
ccacttgacgctgccattttttaccttgcaatgaagaagaaggctgttatctggggatta
tacaggtcccaaaaagatgctaaaatgacacagttttttggaaacaactttactgaggac
agatggcgaaaagcagcattaaagaatgctttttctttgcttggcaaacagcgttttgaa
cattctgcagcatttttcttgttggcaggacacttaaaagatgcagtggaggtctgcctt
gaaaaactgcatgacattcagctggctcttgtaatatctagactttatgaatcggagttt
gaagtgtctagtacctacaaatctgtactacagaagagagttttgggagatgtgtctact
ggaaaagagagctcaggaaacatacactgtgaccctttcctgcgaagtatggcgtactgg
attttggaagattatggcaaggctcttgacactttgattaagcattctattgaagatgaa
ggagatgaaggagatggctcatcaagttgcaatcctgcagtgtttaacttctataactac
ctaagaacacatcctctcttgctgagacggcattttggctcttctgatacatcttccacc
cacatttgcctaacagtagaaaacggattagctgacaaaatcaacctaggtgaaagacgg
ctatttttcaccactgcttatgctcatctaaaagctggttgtcctatgttggccttagaa
gtgttatcaaagatgcccaaagttgtcaagaggtcaaagtcattctgtaaatcccctagt
ttagtggatagtggtaaagatttctcaccatattctccagctaaagagtttgaaacaaaa
gatcaggcttccagtattgattggtcacaaccagtattcaatggctgttcatcttcagat
tgttcatcaggaaaacattcaagttccactctttcctttgattggagccagccaagtgct
ctatttgaagatcaacaattgcaactacagtcagacagtgatgaaaatgatgagagtgaa
gattcttctctggtaatgaaagagctaaaacctctaaagaaaactgaaaaattccatgaa
acaagttccagctacacagaatcttctagtgtagttgatgaccaagatattctaagtcca
tcagaagatatcatttcagcacagctgaagtttagagcatgcctgaaaatccttactgtg
gagcttcgtacactgtccactggctatgaagtggatggtggaaagttgcggtatcagctt
taccagtggcttgagagagaagtggtggctcttcagaagacttgtgattacggtattgaa
gtagaagagatacagtcaggagttacagggatgccagatgaagctacattacatgaaaac
actgaagacctatctgaccaggaaaaagccatgctacagaaagaggactttcagaaaaga
cgtcaatggcttctgaaataccagtctctcctcagaatgttccttagttactgtatactt
catggctcacatggtggaggcttggcatctgtcagaatggaattaattctgctgttgcag
gaatctcagcaggagcagtcagtacagataccttccagcccttcaccagagcaaagctcc
atacctctcctatttgcttgcaccgctagtgccaaaacagtggtggctaatccgttgcta
catcttggcaatttaactcatgatatattacatgctataataaaccttgattcgccacct
catccagatactcagaacagcaagatatatgtaatgcataccttagcagcgtcgctctct
gcttgcatctaccaatgtctctgtgatggccacagctacagctcatttcagggaaatcag
ttcactgggacagtgtaccagacggtcctgttaactcagcgtcattccttacaaacaaca
aacttagaagaaacagtgactcccaacacttcacctgctcagtggccaggaatgatggct
cttatacgtctcttgaattctgctggcgaagaagcccagccaggcctcacagttctactt
tgcgaaattctaactgcggtctatctcagcctgttcatccatggccttgcaacacattct
agcaatgagttgtatagaattatggctcatccacttaacaacaaaatgtggtctgctgtc
tttggaggaggagctcatgtgcctagcagaggacagcagcaattaaagactaaaactgag
gatggagagaaacagcaaaaacactacaggctttcatcaaaaacctctccaaaagagaat
tctcagttgcctgcattgccattggtagaccagcaatcatcatcttacaaagaaagattt
attccccctgagcttagcatctgggattatttcatagcaaagccattgcttccattgcaa
agtagagtggaatatgattcagaagagagtcaggagagtgatgaagatgatgaagacaat
gacggagatgtgtttgcatcaaattcacataaccaggagcattctaattcaaattcttac
agttggtcactgatgagattggcaatggttcagctggtacttcacaatttgaagattttc
taccctttggctggacatgatctttcagagcttccagttagctccccaatatgccatgca
gttttgaaaactttacagcgctgggaacaagttcttctccgacgtcttgagctgtatggg
ggtccacctcaacattatatttcagttcatgcttctgaaggtgcccttgctgctggtcct
gcattgcttcgccacaaaactttactcgagcctacaaacactcctttcagttctagcagt
cgtgttgcactgtctgtgaagaggctctggcaatacttggtcaaacaggaagaagttcag
gaaacttttatcagaaatatttttacaaagaagcgatgcctaaatgagtcgttagtggag
cacagtgaaaccatgaaagattctgtggtggaggagcctgtcatcaacaagatagaaaca
gatttgggataccttggcaaggcaagaataatccataaagagtcagacatcattactgct
tttgcagtcaataaagcaaatcggaactgcattgcaatagcatcaagccatgatattcaa
gaattggatgtttccgcaattttagctacgcaaatctatacctgggttgatgatgacgtg
gaaatagaaaataaaggggctgatgatttcctagttatacatgctcgtgatgatctgata
aatgttcaaggaagcactccttatacacatagtaatcctggcacacctatcaatatgcct
tggcttggtagtacacaaactggcaggggtgcatctgtggaatattccaataaatttaat
gggatcagaaaggaattggcaagaaaagagatgctcaagaaagctattaataatgtcaga
agaatggcttctcatccaacactgccatattacctgacgggtgctcaagatggaagtgta
agaatgtttgaatggggtcatgcgcagcaaatcacgtgttttcgatctggtggcaactca
agggtgactcgaatgcgattcaattaccaaggaaataagtttggaattgttgatgcagat
ggatatataagtttatatcagacaaattggaaatgttgtccacttactggaacttcacct
aagccatatttgacgtggcagtgtcataacaaaacggccaatgacttcgttttcatcagt
tcatcatctttgatagctacagcaggattttcttctgacaacagaaatatttgtctttgg
gatactctggtttctcctacaaatagcttggtgcatgcttttatctgtcatgatagtgga
gcaactgtgctagcatatgctccaaaacaccagctgttgatatctggaggcagaaaaggc
tttacctgtgtaattgatcttcgcctaaagcagcagcaacagttactccagagtcatgat
tctccagtcaaagcaattgctgttgatcctacagaagagtattttgtcacaggatctgct
gaaggcaacataaaggtatggagtctgtctacatttaatcttcttcacactttcatcaat
gagcatgctcgacagtctctcttcagaaatattgggacaggagtcatgcaaattgaaaca
ggaccagcaaatcacatattctcctgtggtgctgatggaacagtaaagatgagaatcttg
cctgatagattcagccctttaaaggatgtgttaaaaaatgatgtgaaatttatgatctaa
DBGET
integrated database retrieval system
