Sylvia atricapilla (blackcap): 136373686
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Entry
136373686 CDS
T10263
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136373686 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136373686 (SMARCA2)
03036 Chromosome and associated proteins [BR:
sati03036
]
136373686 (SMARCA2)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136373686 (SMARCA2)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
136373686 (SMARCA2)
Chromatin remodeling factors
BAF complex
136373686 (SMARCA2)
PBAF complex
136373686 (SMARCA2)
GBAF(ncBAF) complex
136373686 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
136373686
NCBI-ProteinID:
XP_066194729
LinkDB
All DBs
Position
Z:85363323..85481705
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPTQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAAAGP
GSAPGMPGHTTAITPKTWTEGQAPDMGVSNAQQKLPAPAPSGRPSPAPAAAQPAATLPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKATEENAEGMSSGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKIETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtcctcccagtgtctcacatccaatgccgacaatg
gggcctacagattatccacaggaaggcatgcatcagatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccggagcacgtgtccagcccaatgtctggaggaggt
ccaacaccacctcagatgactcccactcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctggcatacaaaatgctggctaggggtcagcccttaccagagaacctt
caacttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcaatgagtggtgctgcagctgggcca
gggtctgcaccggggatgcctggacatacaactgccattacccctaaaacttggactgaa
ggccaagccccagatatgggtgtctccaatgcccaacagaagcttccagcaccagctcct
agtgggaggccctctccggctcctgctgctgcccagcctgctgccaccttgcctgggccc
tctgtaccacagcccccacctggacagccttcacccattgtccagctgcagcaaaagcag
aaccgtatcagccctatccagaagccacagggactggatcctgttgaaatactccaagaa
cgtgaatacaggcttcaggctcgaattgctcacagaatccaggaactggagaaccttcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccaacgccagctaagacaagaggtagtagcctgcatgcgtcgtgacacgacc
ctggagacagccctgaactccaaagcctacaagcggagcaagcgccagactctgagagag
gctcgcatgacagaaaagcttgaaaagcagcagaagatagagcaggagaggaagcgtagg
cagaagcatcaggaatacctgaacagcatattgcagcatgctaaggattttaaagagtac
caccggtcagttgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaagaaagaaactgagagaattgagaaagaacgaatgaggaga
ctaatggctgaggatgaagaaggctaccgaaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtgtgg
gagcacaaacaggcacaagcagccaaagagaagaagaagcggaggagaagaaagaaggca
actgaggaaaatgcagaaggaatgtcatctggtcttggtcccgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagatagtgaagatgaaagtgggtctgaatatgaggag
gaggatgaggaagaagaatcaagcaaaatagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagaggatctcagtcctattacactgtt
gctcatgcaatcaccgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactggggaagacaatacagactattgctctcatcact
tacctgatggagcacaaaagactcaatggtccctatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaagtgggctccttctgtggtgaagatatcctac
aagggtacacctgccatgcgccgctcacttgttcctcagcttcgaagtgggaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatattcttgctaagattcgg
tggaagtacatgatagtagatgagggccaccgaatgaagaaccatcactgcaagctgact
caggtcttgaacactcactatgtggcccctcggagaatcctgctgactgggactcctttg
cagaacaagctgcctgaactttgggctctcctcaatttccttcttccaaccattttcaag
agctgcagcacatttgaacagtggttcaatgctccgtttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgaatctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
gggatacttcttactgacggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
ttaatgaacactattatgcaattgaggaagatatgcaatcatccatacatgttccaacac
attgaggagtccttcgctgaacatctgggctactcaaatggtgtcattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgggct
accaaccaccgtgtgcttctcttctgtcaaatgacatctctcatgaccattatggaggac
tactttgcatttagaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctgggtcacagtactttatcttcttgctg
agtacaagggctggagggctaggcttaaatcttcaggctgctgatactgttataatcttt
gatagcgactggaatcctcatcaggacttgcaagcccaggatagagctcatagaattggt
cagcagaatgaagtgagagtcctgagactgtgcactgtgaacagtgtggaagagaagata
cttgctgcagcaaagtacaagctgaatgtagatcagaaggttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaagaagagccttcctacaagctatattagagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccaggaaccctaaacgtaaacctcgcctgatggaggaggatgagctgccatcctggatt
atcaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
ggaaggggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaaaagacgaagaaacgtggacaaggattctgggaaggaggatggagagaaagca
aagaaaaggagaggcagacctcctgcagagaagctgtcgcccaatccacccaaactgaca
aaacaaatgaacgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccgtctagaaaagaactaccagaatactatgaattg
attaggaagccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttagaaaaagacgtcatgctgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagcgaggatgaaagtaatgatgatgaagaagaa
gatgaagaagaggaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgagagaaaggaaaaggcaagaagaggcaaagtagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
