Sylvia atricapilla (blackcap): 136373758
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Entry
136373758 CDS
T10263
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
sati04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136373758 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136373758 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136373758 (ABCA1)
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
136373758 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
136373758
NCBI-ProteinID:
XP_066194834
LinkDB
All DBs
Position
Z:42162516..42255452
Genome browser
AA seq
2260 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDR
SIKDVQKVLGKLRELGNSSGLDLKLRDFLIDNETFSDFLHHNLSMPSSAVEELLGAGINL
QQVIVSGHRMRLRDLCNTSTSSEFLKTQNQTADSEDFICTLSKEKLHAAEQSFRANLNPL
KPLQRQLSFNSSLWDLSETVETLRASIGNLVKELLSMNSWSDMRQEVMFLTSVNASNSST
QIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCNEL
MKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMSEVNRTFQELGVFRDLGGMWEE
ISPKIWTFMESSQEMDLVRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEDFETENGSV
YTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFTEI
APDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDVVE
QAIIRVQTGTEKRTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVY
EKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVFIF
LSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFASL
LSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMTWY
IESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGSSEVCKEEEPVHLSLGVSI
QNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILG
KDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDVGL
PHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGR
TIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSC
RNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDIGH
ELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETS
DGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMKG
WKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQP
WMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTASV
PESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPAGAGGLPPPQREQDTTDILQNLT
GRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVKKI
LELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQG
ENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLALL
LFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWELVGRNLFAMAVEGV
VFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKIY
RMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNI
QEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKY
AGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFGH
AFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggattgctgctatggaagaactttacctatagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccatggatacaagggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggagtccccaggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggagattactcttgtacagccaacaggacagg
agtataaaggatgtccagaaggtcctgggaaaactacgtgaattgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatctgtccatgccatcatctgcagtagaggagctactgggtgcagggatcaacctc
cagcaggtcattgtgtctggtcatcgaatgcgactgcgagatctctgcaatacctcgaca
tcgtctgaatttcttaagacccaaaatcagacagctgactctgaagacttcatttgcacc
ttgtcaaaggaaaaactccatgcagctgagcaatcctttcgtgctaacctgaatcccttg
aagcctcttcagagacaactttctttcaattcttccttgtgggatctgtcagaaactgtg
gaaactttgagagcaagcattgggaatctggttaaagagctgctgagcatgaatagctgg
agtgacatgaggcaagaggtgatgttcctgaccagtgtgaacgcctcaaactcgtccacg
cagatctatcaggctgtgtcacgcatcgtgtgtggtcatccggaaggtggagggctcaaa
attaaatccctcaactggtacgaagataacaattacaaagcactgtttggaggcaacagc
actgaagatgatgtgattaacttctatgataactccacaacaccctactgcaatgagcta
atgaagaacctggaatctagcccgctttccaggattatctggagggctttgaagccccta
ctgattgggaagatcttgtacactccagatacgccagccataaggaaggtcatgtccgag
gtgaacaggacattccaggagctgggtgtgtttcgtgaccttgggggaatgtgggaggag
ataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcgttcggacg
ttgctgaaaggcaaagccctttgggacctgcacttgccagcttccaactggacagtggag
gatgttgcccgtttcttgtcgaacagtccagaggactttgagacagaaaatggctctgtg
tacacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcccgcttc
atggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccggctcattaac
aagtccttggaacttctggatgagaggaggttctgggctggcatagtcttcaccgaaata
gctcctgacagcacagaccttcctcaacatgtgaaatacaagatacgcatggacattgat
aatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgtgctgac
ccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtggtagaa
caggccatcatcagggttcagacaggcacggagaagaggactggagtttatgtgcagcag
atgccctacccatgttatgtggatgacatatttctgcgtgttatgagccgctccatgcct
ctcttcatgacactagcttggatctactcagtggctgtgataattaagggcattgtgtat
gagaaggaagcccgactgaaagaaacaatgaggattatgggacttgataatggcatcctt
tggttaagttggttcattagcagccttgtacctctcctgatgagtgcaggactgctggtg
ctgatcctgaagatggggaatctgctgccttacagcgatcctagtgtggtgttcattttc
ctctcaatcttcggtgtcgtaaccatcctccagtgcttcctcatcagcaccgtgttctcc
agggctaacctggcagctgcctgtgggggcattgtctacttcacactgtacctgccttat
gtgctctgtgttgcctggcaggaccacatcagcttctctctcaagatttttgcgagcctg
ctgtctccagtagcctttggttttggttgcgagtactttgccctgtttgaggagcagggg
gttggcgttcagtgggacaacttctttgagagcccattggaagaagatggctttagcatc
accacatcagctgtcatgatgctatttgataccttcctgtatggagtaatgacctggtac
attgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcctttcaca
aagtcctattggtttggggaggaaccacaggacaggcagcacccccatcctgaccagaag
gggtcttcagaagtctgcaaggaagaagagccggtgcatctgagtcttggtgtttccatc
cagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctcacactt
aacttctatgagggacaaataacctcctttctgggtcacaatggagcagggaaaaccact
accatgtccattttgactggcttgttccccccaacttcaggtacagccttcatcctgggc
aaagatatccgctctgagcttagcaccatcaggcagaacttgggtgtatgtcctcaacac
aatgtgctcttcgacttgctgactgtggaagagcacatctggttctatgctcggctcaaa
gggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgttggtttg
cctcacaaactgaaagctaggacaagcaggctctctggtggcatgcagaggaagctctct
gttgccttagcatttgttggtggctccaaggttgtcattctggatgagcctacagctgga
gtggatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaaggtcgc
actatcattctctccacgcaccacatggatgaagcagacattctaggggaccggattgcc
ataatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaaccagctg
ggaacaggctattatttgaccctggtcaaaaaggatgtggactcctctctgagctcttgc
cgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccagagcagc
tctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtctctgca
atttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacataggtcat
gaattaacctatgtcttgccatacaaagctgctaaagaaggagcttttgtggagctgttc
catgaaattgatgaccgtctttctgatcttggcatttccagctacggcatctccgaaact
actctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaaacctca
gatggtacattgccagccagaaggaacagacgtgtgtttggagacagacagagctgcctt
cgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatccagcagaa
tccagagagacagatcttctcagtggcatggatgggaaaggctcctaccagatgaagggc
tggaagctcacccagcagcagttcatggctctgttgtggaagaggatgctcattgccaag
agaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtatgtattgct
ctcatgttcagtctgattgttcctccttttgggaagtatcccagcctggagttacaaccc
tggatgtatgatgagcagtacacttttattagtaacgatgctccagaagatgcaggcact
cacaagcttttggacgcccttcttgataagccagggtttgggacacgctgtatgcaggga
cattccatcccagacactccttgcactgtggggcagaaggaatggaccactgcttcagtc
ccagagtcagtcctggacatcttcctgaaaggcaactggagcatggagaatccttcccca
tcttgtgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgccctgctggtgca
ggtggcctgccacccccacagcgtgagcaagacacaactgacatcctccagaatctgaca
ggccgcaatatatcggactacctggtgaagacctacgcacagataattgggaaaagttta
aagaataaaatctgggtgaatgagttcaggtatggtggcttttccttgggagccagcagt
tcccttgtccttcctccaagccatgaagtcactgatgccattaaacaggtgaagaaaatc
ttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagtttcatg
aaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctggcatgcc
attgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccagcagggt
gaaaaccccagtgcttatgggatcactgccttcaatcacccacttaacctcaccaagcag
cagctctctgaagtagctctgatgacgacctctgtggatgtcctcgtatccatctgtgtg
atctttgccatgtcctttgttcctgccagctttgtggttttcctaattcaggaacgtgtc
agcaaggctaaacatttgcagttcatcagtggtgtgaagcctgtgatctactggctggcc
aactttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatcatcttc
atctgcttccaacagaagtcctatgtatcctcctccaacttacctgtgttggctctcctt
ctgtttctctatgggtggtccatcacccctcttatgtatccagcctcctttgtgttcaaa
atccctagcacggcatatgttgtgctgaccagtgtgaatctcttcattggcatcaatggc
agtgtggccaccttcgtcctggagctcttcaccaacaataagctgaaagacatcaatgac
atcctgaagtctgtcttcctcatcttccctcacttctgcctgggccggggactcattgac
atggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcgttttgtg
tcccctctgtcatgggagctggtgggaaggaacctctttgccatggcagtagaaggcgtt
gtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccaggcctgtc
tatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaggcagagg
ataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaagatttac
agaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctggagagtgc
tttggactgctgggagtaaacggtgctggcaagtcatccacttttaagatgctaactggt
gatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtccaacatc
caagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaactgctg
acagggcgagagcacttggagttctttgcactcctgagaggagttccagagaaagaagtc
tgcaaggttggcgagtgggcaattcggaaactgggtcttgtgaaatatggagaaaaatat
gctgggaattacagtggagggaacagacgcaagctttccacagccattgccctcattgga
gggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgtcgc
ttcttgtggaactgtgctctaagtgtaatcaaggaggggagatcagtggtgctcacatct
cacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaatgggcga
ttcaggtgtctgggcagtgtccagcacctaaaaaacaggtttggagatggttacaccata
gtggtgagaattgcaggggcaaacccagacctcaagcctgttgaggagttctttgggcat
gccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcaataccaacttccc
tcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaagagactc
cacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaattttgct
aaggaccaaagtgacgacgaccatacaaaggacctgtcattgcacaaaaaccagactgtg
gtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagttgtgtg
tga
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integrated database retrieval system
