Sylvia atricapilla (blackcap): 136373928
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Entry
136373928 CDS
T10263
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136373928 (ZFR)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136373928 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
136373928
NCBI-ProteinID:
XP_066195097
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All DBs
Position
Z:complement(68917828..68966384)
Genome browser
AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAAAAAAAAATAAWT
GTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKA
SQNTTNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTE
PNVVTQATSSTSTSASKPTASASNIATSSSTVNSSVASSAVKILTPTANTPLNTASNNKT
SSTAANIAVKKISTPKINFVGKYRSGNKLQTTGSKMEEMKSAESVKTPPAATVQTQEVKP
DAAAESVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLK
GRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRY
EEDMYWRRMEEEQHHWDDRRRVPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSS
DDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTDHEKSKNKEGDDKKDGSKD
RALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDI
KCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDA
LAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQ
SPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLA
FRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttggattcacccacagcggggctgctgcccaatac
agccagcagccagcttcgggtgtagcctattcccatccaaccacagttgccagctacact
gtccaccaggccccggtggcggcgcacacagtcactgcagcctatgcccctgccgcagcc
acagtggccgttgctaggcctgccccagtggccgtggcagctgctgccacagctgctgcc
tacggtgggtatcccacagcacacacagctacagactacggctacacgcagcggcagcaa
gaggctccaccaccaccaccccctgtcaccacacagaattaccaggattcctactcctac
gttcgatctaccgccccagctgtggcctatgacagcaaacaatattatcagcagccaacc
gccaccgcagcggccgtggctgctgctgcccagccacagccctcagtggccgagtcttac
taccagacagctccaaaagcaggatatagccaaggggcaactcagtacacccaagcccag
caaacacggcaagtgacagctataaaacctgcaaccccaagtccagcaacaacgacattt
tccatatatccagtgtcctcgactgtgcagccagtggcagctgcagccactgttgttcca
tcctatactcagagtgcaacgtacagcacaacagcagtaacttactctggtacctcctat
tctggctatgaagctgcagtctattcagctgcatcgtcctattaccagcagcaacagcag
cagcaacagaaacaggcggcagcagcagctgctgctgctgctgcaacagctgcttggaca
gggaccacctttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacagcct
cccaaaccaccccagatccactactgtgatgtttgcaagatcagctgtgctggaccacag
acttataaagaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagct
tcccagaacaccaccaacaacagtacttctgctcgtggaactcagaatcagttacgctgt
gagctttgtgacgtgtcttgtactggggcagatgcttatgctgcccatatccgtggagcc
aagcatcagaaagtagtaaagttgcatacaaaacttggcaaacccattccttcaactgaa
ccaaatgtggttacccaagctacttcctcaacgtccacatctgcttccaaaccgactgcc
tctgcttcaaatatagcaactagcagcagtacagtgaactcctctgttgcatcctctgca
gtgaaaattcttactcccacggcaaacacaccacttaacactgcatccaacaacaaaaca
tcttcaactgctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgtt
ggcaagtacagaagtggcaataagcttcagacaacaggaagtaaaatggaagaaatgaaa
tcagctgaaagtgttaaaacacctcctgctgccacagtacaaacacaggaagtaaaacct
gatgcagcagctgaatcagtgactcccacaactcttgctgccttgcaaagtgatgtccag
ccagtgggtcatgactatgtggaggaggtaaggaatgatgaaggaaaggtgatccgcttt
cactgtaaactctgtgaatgcagttttaatgaccctaatgccaaggagatgcatttgaaa
gggcggcggcacagacttcagtacaagaaaaaagtaaacccagacttacaagtagaagta
aagcccagtattcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaa
gaagaatactggagaaggcgagaagaggaggaacgctggcggatggaaatgaggcgatat
gaagaggacatgtactggaggagaatggaggaagagcaacatcactgggatgaccgtcgc
agagtaccagatggaggatatcctcatggccctccaggacctctaggtctgctgggtgtt
agacctggaatgcctcctcaaccccaaggaccagctcctctgcgccgccctgactcctct
gatgaccgctacgtgatgaccaagcatgctgctatatatccaactgaggaggaacttcag
gcagtccaaaaaattgtttctattactgagcgtgctttgaagctggtttctgacagcatg
actgatcatgaaaaaagcaagaacaaagaaggagatgacaaaaaggatggcagtaaagac
agagctttgaaaggcgttttgcgggtgggcgttttggctaaaggtttgctacttcgtgga
gaccgaaatgtcaatctggttttgttgtgtgctgagaagccctccaagacattactcagt
cgtattgctgaaagtctccctaagcaacttgcagtgataagtccagagaaatatgatatc
aagtgtgcagtcccagaagcagcaataattttaaattcgtgtgtggaacccaaaatgcaa
gttacaatcacactgacatctccagtcattcgggaagagaacatgagggatggagatgta
acctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgct
ctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgt
gtgattatcatacgtattcttcgtgacctctgtcagcgggttcctacttggtctgatttt
ccaagctgggctatggagttgcttgtggaaaaagcaattagcagcgctactggaccacag
agtcctggagatgcactgagaagagtttttgagtgcatatcttcgggaatcatcctgaaa
ggtggtcctggccttctggacccttgtgaaaaagatccttttgatacacttgctgtaatg
acagatcagcaacgagaggatattacttcaagtgcacagtttgcgctgagactccttgca
ttccgtcagatacacaaagttctaggaatggatccattaccacagatgaatcaacgcttc
aacatccataataatcgtaaaaggagaagggacagtgatggggttgatggatttgaagca
gagggaaagaaggacaaaaaggattatgataacttctaa
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integrated database retrieval system
