Sylvia atricapilla (blackcap): 136374057
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Entry
136374057 CDS
T10263
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136374057
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
136374057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
136374057
NCBI-ProteinID:
XP_066195307
LinkDB
All DBs
Position
Z:complement(7999963..8010755)
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AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSAQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSTTGTLVPRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPAVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgcaggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaacctgagcaaccatacttcagaagcagtgctcagtggagagaaaaggaggtt
tccaccaaaccacatcgcccactctgccggtccccatgtctggatcgcccaagtttttca
cagagcagtatcacacaagacttgaagctagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaataagttgggagcagatgcgctcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcagtaccactggtactctg
gtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactggaagatgaa
gtggtggataacagtgataacttgaggccaattgtcattgatggaagcaatgtcgctatg
agccatgggaacaaagaaggcttttcctgccggggaattcaactagctgttgattggttt
ttggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaagaaaaaatt
cttgttttcaccccgtctcgaagagttcagggaagaagagtagtttgctatgatgatcgg
ttcatagtaaaacttgcttttgactcagatggcatcattgtatcaaatgataactatcgg
gatcttcagaatgaaaaaccagaatggaagaagttcatagaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgccatggtccaagc
cttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacagccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactagaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgagtcactgggggac
catggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttac
ggaactgaagagcctaagcaatcccttcggaaacagtcagtttcccacttaggcctccat
gcccagcatcccgctgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aatgttcatccatcaactgcacaaccaagccgtgccttggtgatgacaagaatggacagt
atttctgactcacggctttatgaaagtaaccccacaaggcagagacgaccacctctctgt
cgagagcagcacgccagctgggatccattaccctgtgcatcagactcttacacctaccac
tcatacccactcagtaacaacctcatgcaaccatgttatgaacctgtcatggtaagaagc
atgcctgagaagatggagcagctctggagaaatccctggattgggatatgtggtgagcca
cgggaacctcacatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccaagcgttgtcctttctgtgatggaaaaaaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttag
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