Sylvia atricapilla (blackcap): 136374110
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Entry
136374110 CDS
T10263
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136374110 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136374110 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
sati03016
]
136374110 (ZCCHC7)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
136374110 (ZCCHC7)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
136374110 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
136374110
NCBI-ProteinID:
XP_066195386
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Position
Z:11081918..11164558
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AA seq
601 aa
AA seq
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MDQNSDSSLSRMFAGYDDPENTEGYEDELYPEESSSEQSVDSEVEFHLYSQIHYSQDLGE
IRTQEMDEEADVVEVMDQSSGLTEKQDEDEKLTELTDGGTQLSNEPEIIVLSDTPDEDSI
YKSKARRSRCSSAQGKTHIQPVSSTASHTKAAGCNALCPPESGVGTPRQRNSTSGRPTLV
CSAGPQAVHDTLVIDNSSEEESLISDSDNVESWMLLGADVDDRDGDIMLNLEGCATSIRG
GTIDVNWSISHKDLEAQISNYAGARHSSTRYYTSDKNITCRNCHRPGHLSKNCPTPKKVP
PCCLCAGRDHLQHSCPARFCLNCCLPGHYFKECLERAYWNKHCNRCDMKGHYADACPEIW
RQYHLTTKPGPIKAADSHSERSVSVYCYNCSRKGHFGYECSEKRMHGNMFPTSPFIYYYD
DECDIKRRANRLKRKVADLQEAGLLPEQSETLLQEEQLEWNRGRTTQPQNTVEEEQPSHK
KKTKLWKEQKKQSRNSEQKKKMKVPWAKKPQERKHRRGVEIHCQPEDFPRGYKQQGCKGS
RVHHKSLFQAFSGSKAMHVQWPLEAAKKKKKLKRQKNASPDSRDNLFLIKQRKKKSKQKS
W
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaactcagactcttcactttccagaatgtttgccgggtatgatgatcctgag
aatactgaagggtacgaagatgaactttatcctgaggagtcatccagtgagcagagtgtt
gatagtgaggtggagtttcatctctatagccagatccactattcccaggatcttggagaa
atccgcacgcaggaaatggatgaagaagctgatgttgtagaagtcatggatcaaagttca
ggtctaactgagaaacaggatgaagatgagaagctcacagaactcactgatggtggtact
cagctttccaatgagcctgagatcatcgtgctgtctgatacaccagatgaagacagcatc
tacaaaagcaaggcaaggaggtcaagatgctcttcagctcaaggtaaaacacacatccag
ccggtatcttccacagcaagtcacaccaaagctgctggatgtaatgccctgtgtcccccg
gaatctggtgtgggcacaccaaggcagagaaacagcactagtgggaggcctaccctagtc
tgttctgctggacctcaagccgtgcacgacacgttggtgatagacaacagctcagaggag
gagagcttgatctctgacagcgataacgtcgaaagctggatgctcttgggagctgatgtt
gatgacagggatggagacatcatgttgaaccttgagggctgtgccacttccatccgcgga
ggaacaattgatgtgaactggtccatctctcataaagacttggaggcacagatctccaac
tatgcgggcgcaaggcacagcagcacgcggtactacacatctgacaaaaacattacttgt
aggaactgccacagaccaggacatttgtccaagaactgtcccactccaaagaaagttccc
ccgtgctgtctgtgtgcaggaagagaccatctgcagcacagctgcccggcacgtttctgc
ctgaactgctgcttgcccgggcactatttcaaggaatgcctggagagagcctattggaac
aaacactgcaaccgctgtgacatgaagggccactatgctgatgcttgcccagaaatatgg
aggcagtatcacctaacaacaaagccaggacccatcaaggcagcagattcccactcagag
cgctctgtgtctgtgtactgctacaactgctcccgcaaaggacacttcggatacgagtgc
tcagaaaagcggatgcatggaaacatgttccccacttctcctttcatctactactatgat
gatgaatgtgatatcaagaggagagccaacaggttgaaaagaaaggtggcagacctgcag
gaagctggccttctgccagaacagtctgaaacattgctgcaggaagaacagcttgagtgg
aacagaggaagaacaacccagccacaaaacaccgttgaggaagaacagcccagccacaag
aaaaagaccaaactctggaaggaacagaagaagcaaagcaggaacagtgagcagaaaaag
aagatgaaggtgccttgggcaaagaaaccccaggagagaaagcacaggagaggtgttgaa
atccactgccaaccagaggacttccctcgggggtacaagcagcagggttgcaagggcagc
agggtccaccacaagtcccttttccaggcattctcaggcagcaaggccatgcatgtgcag
tggcctctagaagctgccaaaaagaagaagaaattgaaaaggcagaaaaatgctagtcct
gacagcagggacaatctattccttataaaacagcggaagaagaagtccaaacagaaatcc
tggtga
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