Sylvia atricapilla (blackcap): 136374236
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Entry
136374236 CDS
T10263
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04310
Wnt signaling pathway
sati04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136374236
04330 Notch signaling pathway
136374236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136374236
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
136374236
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
DSE1_N
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NOL10_N
ASA1
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
WD40_RFWD3
HALZ
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
136374236
NCBI-ProteinID:
XP_066195633
LinkDB
All DBs
Position
Z:complement(52780775..52884792)
Genome browser
AA seq
774 aa
AA seq
DB search
MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLASEK
TEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQV
TMAELNAIIGQQQLQAQHLSHGHGLPVPLTPHPSGLQPPAIPPIGSSAGLLALSSALGGQ
SHLPIKDEKKHHDNDHQRDRDSIKSSSVSPSASFRTAEKHRNSTDYCSDSKKQKTEEKEI
AARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENGLDKTRLLKKDAPISPASIASS
SSTPSSKSKELSLNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVPGKPPGVDPIASG
LRTPMAVPCPYPTPFGIVPHAGMNGELTSPGAAYAGLHNISPQMSAAAAAAAAAAAYGRS
PVVGFDPHHHMRVPGIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHAR
QINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSC
RLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG
NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF
TSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFAHCGKWFVST
GKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgacctgagcaagatgtacccgcagacccggcatccggctcctcaccagcca
gctcagccctttaaattcaccatttcagaatcctgcgatcggattaaggaggagtttcag
tttttgcaggctcagtaccacagtttaaagctagaatgtgaaaaactggccagtgagaag
acagagatgcagcgacattatgtcatgtattacgagatgtcctatgggctgaatatagag
atgcataaacaggcagaaattgtcaagaggctgaatgctatatgtgcgcaagtcattccc
ttcctgtcccaagagcaccagcaacaagtggtgcaggctgtggagcgtgccaaacaagtg
accatggcagaactgaacgcaatcattgggcagcaacaactccaggcccagcacttgtca
catggacatggtctccccgtgccactcactccgcacccctcgggcttgcagcctccagcc
atccctcccatcggcagcagtgctggtctcctggcactctccagcgccctgggggggcag
tcccacctcccaattaaagatgagaagaagcaccatgataatgatcaccaaagagacaga
gactccatcaagagctcttctgtatctccctcagctagtttcagaacagcagaaaagcac
agaaattcaacggattattgttcagatagtaaaaaacagaaaacagaagagaaggaaata
gcagctcgttacgacagcgatggtgagaagagtgatgacaacttggtagttgatgtttcc
aatgaggatccttcttctccccgtggaagcccagcacactctccacgggaaaatggcttg
gacaagactcgactgctgaaaaaagatgcaccaattagtccggcatctattgcatcctct
agcagtactccttcttccaaatccaaagaacttagccttaatgagaaatctaccactcct
gtgtctaaatcgaataccccaactccgcggactgatgccccaactccaggcagtaactcc
actcccggactgaggccagtgcccggcaaacccccaggtgtggatccaatagcttcaggt
ttaaggacacctatggcagtaccgtgtccttatcctactccatttggtatcgtgccccat
gctggtatgaacggggagctgaccagccctggagccgcctatgctggtctgcacaatatt
tcccctcagatgagtgcagcagctgcagcggcggcggcggcggcagcttacgggcgatct
ccggtggttggttttgatccacatcatcacatgcgagtcccaggcatccctcccaatctc
acaggcatcccgggaggaaaaccagcttactcatttcatgtaagtgcagatggtcagatg
cagccagttcccttccctcctgatgccctcatcggtccaggaatccctcgccatgcccgt
cagatcaacaccctgaaccacggggaagttgtgtgtgcagttaccatcagcaaccccaca
agacatgtgtacacaggtgggaagggctgtgtcaaggtctgggacatcagccatcctggc
aacaagagtcctgtctctcagctggactgcctgaacagagacaactacatccgttcctgc
agattgctccctgacggccgcaccctgattgttggtggggaagccagcacgttatccatt
tgggacctggcagctccaactcctcgcatcaaggcagagctgacatcttctgctccagcc
tgctatgccctagctatcagccctgattccaaggtctgcttctcttgctgtagtgatggc
aacattgcagtgtgggatctgcataatcagactttagtaaggcaatttcagggccacaca
gatggagcaagctgtattgatatttctaatgatggcaccaaattatggacaggaggtctg
gacaatacagtcagatcctgggatctcagagaagggagacagctacagcaacatgacttc
acatcacagatcttctcactgggctattgtccaactggtgagtggttggcagtaggaatg
gagaacagcaatgtcgaggtgctgcacgttactaagccggacaagtatcagctgcatctt
catgagagctgtgtgttgtcactcaagtttgctcactgtggcaaatggtttgtaagcact
ggaaaagataatcttcttaatgcttggagaacaccttatggagccagtatattccagtcc
aaagaatcctcatctgtgcttagctgtgatatctctgtggatgacaaatacattgtcact
ggctctggggacaagaaagctacagtctatgaagttatttattag
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