Sylvia atricapilla (blackcap): 136374250
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Entry
136374250 CDS
T10263
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136374250 (TMC1)
03037 Cilium and associated proteins [BR:
sati03037
]
136374250 (TMC1)
Transporters [BR:
sati02000
]
Other transporters
Pores ion channels [TC:
1
]
136374250 (TMC1)
Cilium and associated proteins [BR:
sati03037
]
Other cilia and associated proteins
Stereociliary proteins
136374250 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
PFF1_TM
Piezo_TM1-24
COX16
Motif
Other DBs
NCBI-GeneID:
136374250
NCBI-ProteinID:
XP_066195651
LinkDB
All DBs
Position
Z:30453743..30517272
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AA seq
947 aa
AA seq
DB search
MTKQNESTERNDGSDDNKEGSAVENEEAAKGTDKGRKKATPRTRRTHDRERHGDEEDEDD
EYGTRRTGHRRHRSRRRGRAAGNEASDSDMEPEKARKNQANQKSKEDNDEDEDEKGGKSG
KGKNEKKGDKKPDKKGKKEKANKKKKDKKKSGSGSDSESEEEPITEEELAKLKEEVEEKK
KLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWMKFQRDF
ENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKP
YGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMPLSYFLV
GVGSIGYSFMIVTRTMAKNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITT
SFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQQFALEGLEN
YGWWERNEVNTVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNLYTFIIA
LMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWETMVGQE
FVRLTVSDMMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNVLGLIFN
QGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYMAMLLFI
LFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYASNPGLIL
PFILLMVLSLYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEENPFETE
PPPSKPKEDKKDESTPNKDNKKGQDGNGSKNKDQPEEASSSQTLQHPGPVLNGHYPPQGR
GGNLPPPSIAVTRPPGPRRPGVPGYPPGNPCLPGMQPAMPRGPPMYR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacagaacgagtcaacagaaagaaatgatggcagtgatgacaataaagaaggc
agtgcagttgagaatgaggaagctgccaaaggcacggataaagggaggaagaaagcaaca
ccaagaaccagaaggacacacgacagagagaggcatggtgatgaggaggatgaggatgat
gaatatgggactaggagaactgggcatcgcaggcacaggagccgtagacgaggacgagcc
gctggaaatgaggccagtgattctgatatggaacctgaaaaagccaggaagaatcaggca
aatcagaaatccaaggaagataatgatgaagacgaagatgagaaagggggtaaaagcggg
aaaggtaaaaatgagaagaaaggggacaaaaagcctgataaaaaagggaaaaaagagaag
gccaacaagaagaaaaaagacaaaaagaaatcaggatcaggctctgattctgaatctgag
gaggagccaattacagaggaggagttggccaagctgaaagaagaggtagaagaaaaaaag
aaactcattgccacactaaggaacaagccatggaagatgaaaaagaagttgtctgtcctg
aaggaagcacagctttttgttgaaaagtttgaaggtgcccttggaaaaggaaaaggaaaa
aaattctacgcatacaaagtgatgatgaccaagaaatggatgaaatttcaaagagatttt
gaaaattttaagacagcctgcataccgtgggaaatgaaaataaaggagattgaaagtcac
tttggctcatcagtagcatcttatttcatattcttgcgttggatgtatggaataaacatg
attctctttggactgacctttggtcttgtaatggtgcctgaggctttgatgggtaagcca
tatggctctttgcctagaaaaactgtcccaagagctgaagaagcaacagctatgaatttt
gctactctctgggattttagtggctttgcacagtactctgtactcttttatggttattac
aataaccagaggacaatcgggtggctcaagttcaggatgcctctttcatatttccttgtt
ggagttgggtctattggctatagctttatgattgtcactcgaacaatggcaaagaatgca
aatgatgatggtggtggggatgacactagctttaatttcagctggaaaatgttcacaagc
tgggactaccttattggcaatcctgagacagcagataataagtttgcctccatcacaaca
agctttaaggaagcaatcgtggaggagcaggagagccgaaaagaagaaaatattcatttg
actcgattcctaagggttcttgctaacttcttagccctatgcacacttgctggaagtggc
tacctcatcttttttgtcgtcagaagatcccagcaatttgccttggaaggtctggagaac
tacgggtggtgggaaagaaatgaagtgaacacggttatgtcacttttaggaatgttctgt
ccaactttatttgatgtaattagttctctggaaaattaccaccctcgaatagctctaagg
tggcagctgggaagaatttttgctctttttcttggcaatctctacactttcatcatcgcc
ctaatggatgaaatcaacctcaagttggaagaagaaaagatagtcaaatacaacatgaca
atatgggaagccagtctgtacaatggtactattccagagaattcaactgcccctccgata
caggtggatcctgctgatgtccctagagggccatgctgggaaacaatggtaggacaggaa
tttgtgcgcctgacagtctctgacatgatgacaacatacatcacaattctaatcggtgat
tttttgagagccgtctttgttaggtttttcaattactgctggtgctgggacttggagtat
ggatttccatcatattctgagtttgatataagtggaaatgtgctgggactgatctttaac
caaggcatgatctggatgggatctttctatgctccatgtctcccagcaatcaacgtgttc
cgcctgcacacatcaatgtacctgcagtgctgggcagtgatgtgctgcaatgtcccccag
gaacgggtcttcaaggcttccagatccaataacttctacatggccatgctactcttcatc
ctctttctctccacactgcctgctgtgtacaccattgtctccatcccaccatcttttgac
tgtggtcctttcagtgggaagactagaatgtttgaagtcatatcagaaactctggagcat
gacttcccttcctggtttgggaaggtatttggctatgcctctaaccctggacttatcctc
ccctttatattgctgatggtcctgagcctttattatctcaacgcaacatccaaatcctac
aaggaagctaatttggaacttaaaaagaagttacaaagtcaagcagaagaaaataaaaga
agaaataaacaaaaggcacaaaaatcaaatgaacaagaggaaaatccatttgagacagaa
ccaccaccatcaaaacctaaagaagacaaaaaagatgaatccactccaaacaaagacaac
aagaaaggacaggatggcaatggatcaaagaacaaagaccaaccagaagaagccagctcc
tctcagacacttcagcatcctggccctgttctgaatggccactatcctccacaaggccga
ggaggaaaccttcctccaccatccatagctgtgacaaggccaccggggcccaggaggcct
ggggtgccaggttatccacctggaaatccatgcctcccagggatgcagccagcaatgccc
aggggccctcccatgtaccgataa
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