Sylvia atricapilla (blackcap): 136374297
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Entry
136374297 CDS
T10263
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
Cilium and associated proteins [BR:
sati03037
]
Other cilia and associated proteins
Stereociliary proteins
136374297 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
Other domain-containing proteins
Others
136374297 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136374297
NCBI-ProteinID:
XP_066195695
LinkDB
All DBs
Position
Z:complement(86184091..86337562)
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AA seq
2251 aa
AA seq
DB search
MKEKTEKNKTDEEEEEEEEEEEVVEEVAEEDGEEESQEKKSKKKSKSEDSEADGEVKKKK
KKKTKKREYSSEDDDDYERRKKKKKKGKKGKDKKKKKGDKSKKGKIDDNFLEMYEQELRD
YHSDSSNATEDEYNKKKVYEVVTVTGDVRGAGTDANVFVTLFGEHGITPKTHLTSKSSTA
FERSKTDVFRVKTNNVGQIKKIRIEHDNTGLNAGWFLDRVIVTDMNRPHLRFYFPCNNWL
SKEDGDGLYVRDLVGSLNPMDVPKINKYVVRVFTGDVSGSGTDADVFINIFGEKGDTGVR
KLDNDKDNFEKGAEDKFTLDAPNLGKLRKINIGHNNKGGSAGWFLAKVIIEDIGNKCVYQ
FPVGRWFALDEDDGKIQRDILVGGTEATGIVYNVAVVTGDIRGAGTNSKIHVILHGSKGL
KNSGKIFLEGGEFERARTDLFNVEIAALLSPLSRVTIGHDNCGVSSGWFCEKVVVYCPFT
GIEQTFPCGKWLDEDEGDGLIERELYEMVSLRQKRLKKNPWSLWIWTSDIKNAGTDATIF
FQIYGDKGKSDEMKLDNNSDNFETGQTDKFMIELPDLGTFYKLRIWHEKRNPFAGWHLNK
VTLLKTLTKEKYSFNCGRWLDINEEDNEIVRELPAEGSLVTEVMPVIKYRVTVCTGTVSG
SGTDANVFVCLIGDQGDTGERVLYNCINTVNKFEKGNADEFFIEAVTLKQVRRVRIGHDG
KGGSSGWYLAKVIVREEGQPESEAVEFPCYRWLDKNEDDGQIVRELVPAGESPLLKNVSY
HISVKTGDIPGASSDSKVFIKLYGEKGDSSKEPLLVSDNDLGNYFERGRVDEFTLDMMDI
GKINRILIGHDNVGLRSGWFLASVQITVPVQGKQYMFPCNRWLDKDEADGRVEVEVYPSE
ILPTEKLINYEVSVVTGNVRAAGTNAKVFMQIYGETGKTELIILENRSNNFERGATDIFK
REAADVGKIYKIRIGHDGTGIGDGWFLESVTLKRLAARAKESDKNEKKKNSDEDKGEETK
EEGEMDVYTFVAHRWLAKDEGDKELVVELVPDGESDLEENTYEVHVLTGIVWGAGTDANV
FLSIYGVERGDTGERQLKRSNNLNKFEKGQVDVFTIKAIDLGELKKLRIRHDNTGASPSW
FLERVEIVDLKESITYYFPCQRWLAVEEDDGQIARELVPVDEAFVKKDTENDGQSPATLG
LEQKAKSTTYTVKVKTGDKKNAGTDANVFIILYGSKDDTGIVSLKASKINKNKFERGKVD
EFTVESVDIGDLKKIKIGHDNKVVPYEITVYTSDIFGAGTDADVFIVLYGSDGNCTQQKS
LCLNKREQRMYFERNSVNQFIVELEDVGDIIEKIRIGHHGGGLNSGWHLDRVTIRRLLPN
GKGSETVTFPCERWLAKSEDDGETVRELVPSDIFTEKLMKDGTLKQIEEEVEDPLEVHTY
KISVFTGDIYGAGTDANVFLNIYGDLGDMGERKLSKSETNFNKFERGQEDTFTIQTVDLG
ILYMIKIRHDNSMFSPDWFLEKVEILDETTEESFVFLCERWLSRKKEDKKIERTLYEQSY
HGERNGVDASSLSMSSQDSNANPKEPKKSSLVKAVEEGSLIPYHITVRTGTEYDSSTDSR
VFLIIMGPQKVQTERLWLDLPEGKDEFADGSVEKFSVWGLDVGEIKKVEVGHDGATPESA
WLMEELTIVVPTKGVMYNFVCKCWLARDKGDGLTSRILNILDAESVNIGIKILYEVTVVT
GDIESGGTDASIFMTVFGSNGNTEEMLLEKNGDRFERGQEDSFIMEIADIAPLRKMRIRT
DGKGTRPHWFMERITLKNLTNQEVATFTYGDWLSKLKNAQGSLVCEMPAVINDEQMMEDT
TYTLQVKTSDIGGAGTDANVSLILFGEYGDSGTLPLKESNKSNKFERNQMDEFSFSEMLS
LGDLCKVRIWHDNKGIAPGWHLEYIDVMDSAMDKTFRFQCDRWLAKGEDDGQLIRELACA
NNDILELKERTAYEILTVTSDREDADTKENIWIILEGKMGRSKEFLMENSSKKRRFERGT
TDTFQFSSKNVGDIAAICVGHCPKDGKKSSAKADVFWHVQEIIVTEMELCNKYFFRCNTK
IPLRYKRRDYKVFECAKVTESFASKARSLVPVKYETIVVTGFEKGAGTDANVFITIHGLN
GDSGRRALKQKFRNLFERGKTNRFYLETLDMGELKKVRIEHDNTGLAPGWLVERVEITNS
ATGVTTIFPCGKWLDENRGDGLICRDLFPRY
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagactgaaaagaacaaaacagacgaggaggaagaggaggaggaagaggaa
gaggaggtagtggaagaggtagctgaggaagatggggaagaagaaagccaggagaaaaaa
agcaagaagaaatcaaagtctgaggactcagaggctgatggggaagtgaagaaaaagaaa
aagaaaaagaccaagaaaagagagtatagcagtgaggatgacgatgactatgagcgaaga
aagaaaaagaagaaaaaaggcaaaaaaggcaaagacaagaagaagaagaagggtgacaag
tccaagaaaggaaagatcgatgataattttttggaaatgtatgaacaggagcttcgggac
tatcactcagactcctccaatgccacggaagatgaatacaacaaaaaaaaagtttatgag
gtggtgacagtgacaggagatgtccgaggagcaggaactgatgccaatgtctttgtcact
ctctttggagagcacgggatcactcccaagactcatctcaccagcaagagcagcacggcc
tttgagaggagcaaaacagatgtgttccgagtgaaaaccaacaacgtcggacaaataaag
aaaataaggattgagcacgacaacaccgggctgaacgcagggtggttcctcgaccgcgtg
atcgtgaccgacatgaacagacctcacctccgcttttacttcccctgcaacaactggctg
agcaaggaggatggggatgggctctatgtcagagacctcgttggcagcctgaatcccatg
gatgtgcctaaaatcaacaaatacgtggtccgggttttcaccggcgatgtcagcggcagc
ggaacagatgcggatgtcttcattaatatcttcggtgagaaaggagacacaggtgtgagg
aaactggacaatgacaaagacaactttgaaaaaggagcagaagacaagttcacgctcgat
gctccaaatctgggaaaattaagaaaaattaatatcgggcataataacaagggtggctct
gctggctggtttcttgcaaaggtgatcattgaggacattggcaataaatgtgtgtaccaa
ttcccagtgggacgctggttcgccttagacgaagatgatgggaaaatacagagggacatt
cttgtggggggcactgaagccacaggcattgtgtacaacgtggctgtggtgacaggagac
atcagaggagccggcaccaactccaagatccacgtaatcctccacggctccaagggcctg
aagaacagcgggaagattttcttggaaggaggtgaatttgagcgtgccaggacagatctc
ttcaacgtggagattgctgctcttctcagccctctcagcagggtcaccattgggcatgat
aactgtggtgtcagctctggctggttctgtgagaaggtggtggtttactgcccattcact
gggattgaacaaaccttcccatgtgggaagtggctggatgaagatgaaggggatggtctc
atagagagagaactctacgagatggtgtccctgcgccagaaaaggctgaaaaaaaacccc
tggtctctgtggatctggacaagtgacattaaaaatgcaggaacagatgccaccatcttc
ttccagatttatggagacaaagggaagtcagatgagatgaagctagacaacaattcagac
aactttgagactggacagactgacaaattcatgatagagcttcctgacctcggcaccttt
tataagcttcggatatggcacgagaaaagaaatccctttgctggctggcatctgaataag
gtaactctgctgaaaacgctgacaaaagaaaaatactcattcaactgcggccgctggcta
gatataaatgaagaggacaatgagatcgtgcgggagctccccgccgagggatctctggtg
actgaagtcatgccagtgatcaagtaccgggtgacagtgtgcacgggcacggtgagtggc
agtggcacagacgccaacgtcttcgtctgcctcatcggtgaccagggcgacacgggcgag
cgtgtcctctacaactgcatcaacaccgtcaacaaattcgaaaaaggcaacgctgatgaa
ttcttcatcgaagcagtaacgctgaagcaggtgaggagggtgaggatagggcatgatggc
aaaggaggaagcagtggctggtaccttgccaaagtgatagtgagggaagaaggacagcca
gaaagtgaggctgtggaattcccctgctacagatggcttgacaaaaatgaggacgatggt
cagattgtccgagaattagtgcctgctggggagtcaccactgctgaaaaatgtcagttat
cacatcagtgtgaagacaggagatatccccggtgccagctcagattccaaagttttcatc
aaactctacggtgaaaaaggagactccagcaaagagcctctcttagtctctgataacgat
ctaggcaattattttgaacgtggtcgagtggatgagtttactctagatatgatggatatt
ggaaagatcaaccggatactgattgggcacgacaacgttggtctgaggtctggctggttc
ctggccagtgtccagatcacagttccagtccagggaaagcagtatatgttcccctgcaac
cgatggcttgacaaggatgaggctgatggcagggtggaggtggaggtctacccaagtgag
attttgcctactgagaagttgataaactatgaggtgtctgtagttactggaaacgtgcga
gccgcaggcaccaacgccaaagtcttcatgcagatttatggtgagactggcaaaacagaa
ttgatcatcttagagaacagatccaacaactttgaaaggggagccacagatatcttcaag
agggaggctgcagatgttggcaagatttacaagattcggataggccacgacgggacgggc
attggggatggctggttcctggaaagcgtcacgctgaagcgcctggccgccagagcaaag
gagtctgacaaaaatgagaagaaaaagaattctgatgaggacaaaggggaggagaccaag
gaggaaggagaaatggatgtctatacgtttgtggcacatcgctggctggctaaggatgaa
ggggataaggagctggtggtggagctggtgcctgatggagaatctgacctggaggaaaat
acgtatgaagtccacgtcctcaccgggattgtgtggggggctgggacagatgctaatgtc
ttcctgagcatctacggtgtggaaagaggagacacgggtgagcgccagctgaaaaggtca
aataacctcaacaagtttgagaaaggacaggtagacgtgttcaccatcaaagccattgac
ctgggcgagctgaagaagctgagaatccgccacgacaacactggtgctagccccagctgg
ttcctggagagggtagagatagtggacctcaaagagagcatcacgtattattttccgtgc
cagaggtggttggcagtggaggaagatgatggtcaaattgccagggagctggtcccagtg
gatgaagcatttgtaaagaaagatacagaaaatgacggccagtctcctgcaactttgggc
ctggaacagaaagctaaatcaacgacatacacagtgaaagtgaaaacgggggacaagaag
aatgctgggacagatgccaacgttttcatcatactctatggaagtaaagatgatacaggg
atagtcagcctaaaggcctcaaagattaacaagaacaaatttgagcgtgggaaggtagat
gagtttacagtggagtctgtggacattggagacctgaaaaaaatcaagataggccatgac
aataaagttgttccttacgagatcacagtgtacaccagtgatatttttggagctggcaca
gatgcagatgtcttcattgttctttatggaagtgatgggaattgcactcagcaaaaatcc
ctgtgcctcaacaagagagagcaaaggatgtattttgaaaggaattcggtgaatcagttc
attgtggagctggaggacgtgggtgacatcattgagaagatccgcataggacaccacggt
ggagggctgaactcggggtggcacctggatcgtgtgaccatccgcaggctgctgccaaac
gggaagggctcagaaactgtcacatttccatgtgaaagatggcttgcaaagtctgaagat
gacggcgagactgtcagagaactggtgccatctgatatttttactgaaaagctcatgaag
gatgggacactcaagcagatagaggaagaagtcgaagaccctttagaagttcacacatac
aagatcagcgtgttcactggggatatctacggtgctgggacagatgccaatgtcttccta
aatatctatggagacctgggggacatgggagagagaaaactcagtaaatccgaaacaaac
ttcaacaagtttgaaagaggacaggaggacacattcacaatacagactgtggacctcggc
atcttatacatgatcaagattcgtcatgacaatagcatgttcagtcctgactggtttctg
gagaaagtggagatcctggatgaaaccacagaggagtcgttcgttttcctgtgcgagcgc
tggctctccagaaagaaagaggacaaaaagatagagcgtacactttatgagcagagttac
catggcgagcggaacggtgtggatgcctcctctctcagcatgtccagccaggacagcaat
gccaacccgaaggagcccaaaaaatccagtctggtcaaggcagtagaggaaggctcactg
atcccgtaccacatcaccgtcagaacgggcacggagtatgactccagcaccgacagccgc
gtcttcctcatcatcatgggcccccagaaagtgcagactgagaggctgtggctggatctg
ccagaaggaaaggatgaatttgcagatggctctgtggagaagttttcagtttggggcctg
gatgttggggagatcaagaaagtggaggtggggcacgacggcgctacccctgagagcgct
tggctgatggaggagctcaccatcgtcgtgcccaccaagggcgtcatgtacaactttgtc
tgcaagtgctggctggccagggacaaaggtgacgggctcacctcaagaatcctcaacatc
ctggatgcagaatccgttaacattggcatcaagatcctctacgaagtcacagttgtcact
ggagacatcgaaagtggcgggaccgacgccagcattttcatgactgtctttggatccaat
gggaacactgaggagatgctgctggaaaaaaatggagacaggtttgagaggggtcaggag
gacagtttcatcatggagatcgctgacatcgcacccctgaggaagatgaggatccggacg
gatgggaaggggacgcgcccgcactggttcatggaaaggatcaccctgaagaatcttact
aatcaagaagtggccacatttacctatggggattggctgtccaagctgaaaaatgcccag
ggaagcctggtgtgtgagatgccagctgtcataaatgacgagcagatgatggaggacacc
acatacactcttcaggttaaaaccagtgacattggaggagcaggcactgatgccaacgtg
tccttgatcctgtttggggagtatggggacagtggcaccctgcctctgaaggagtccaac
aagtctaacaagtttgagaggaaccagatggatgaattcagcttctctgaaatgctgagc
ctgggagacctctgcaaagtgcggatctggcacgacaacaaaggaattgccccaggctgg
cacttggaatatattgatgtgatggactctgccatggacaagacatttcgcttccagtgt
gatcgctggctggcgaagggtgaggacgatgggcagctcatcagggagctggcctgtgcc
aacaacgacatcctggaactgaaggaaaggactgcctacgagattctcacagtaaccagc
gacagagaggatgcagataccaaggaaaacatctggatcatcctagaagggaagatgggc
cgctcaaaggaattcctaatggaaaactcctccaagaaaaggagattcgaaaggggaaca
acagacacattccagttttcttcaaagaacgttggtgatattgcagccatctgtgttggt
cactgcccaaaagatgggaagaagtcatctgcaaaagctgatgtcttctggcatgtccag
gagattattgtgacagagatggagctttgcaacaagtactttttcaggtgcaacacgaag
atccctctgcggtacaagaggcgggactacaaagtcttcgagtgtgccaaggtgacagag
agctttgccagcaaagcacggagcctggtgccggtcaagtacgagaccatcgtggtcacg
ggcttcgagaagggtgcgggcaccgatgccaatgtcttcatcaccatccatggcctcaac
ggggactcgggccggcgcgccctgaagcaaaagttcaggaacctcttcgagagaggcaag
accaacaggttctacctggaaacactggacatgggggagctgaagaaggtccggattgag
cacgacaacactggcctggccccaggctggctggtggagagggtggagatcaccaactcg
gccaccggcgtcaccaccatatttccctgtgggaagtggctggatgaaaacagaggggat
gggttgatctgtagggacctttttcctaggtactga
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integrated database retrieval system
