Sylvia atricapilla (blackcap): 136374596
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Entry
136374596 CDS
T10263
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
136374596 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136374596 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136374596 (PCDH11X)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136374596 (PCDH11X)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Protocadherins
136374596 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
K319L-like_PKD
Cadherin_4
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
136374596
NCBI-ProteinID:
XP_066196102
LinkDB
All DBs
Position
Z:complement(3884336..4088553)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKESDVEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQVGWNNSSNPFFSLVLVSVRIHGNNLQRNAAT
GCSVVLLSRVNMIEL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttgttggcctgcatcgtgttccaa
tctggcgcgcaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaacctgctcaaggatctcaacctgacgctggacccggacgtgcccctgtcctccccg
ctgcagttcaagctggtgtacaagactggggacgtgcccctggtgagagtggaggagaac
acgggggagatcttcacggccgccaaccgcattgaccgcgagaagctgtgcgccggcatc
ttcagcgagaaccgctgcttctacgaggtggaggtggctgttctgcccgacgaggtgttc
aggctggtcaagatcaggttcctgatcgaggatataaatgacaacgccccacttttcccc
tcgacagtcatcaatatctctatccctgagaacacagccattaattcccgctactcggtc
ccatctgccatcgacccggacatcggcgtgaacggtatccagcattatgagctcctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggtcaaaacgta
tttggtcttgacataactgagacacccgagggggataagtggcctcaactgattgtccag
cagatcctggacagggagcagaaggacacctatgtgatgaaaatcaaagttgaggatggc
gggagccccccgaggtccagcactgccatcctgcaggtgacggtgaccgacgtcaacgac
aaccgcccggtcttcaaggagagcgacgtcgaggtcagcgtgcccgaaaacgcccccgtg
ggcacctccgtgtcccagctgcacgccaccgacgccgacctgggctcaaatgcacagatc
cacttctatttcagcaaccagatctccagtctggccaaaaggctctttgccatcgacaac
accactggcctcatcaccatcagggagccgctggacagggaggagtctcctgtgcacaaa
ctgactgttttggcaagtgatggcagctccactccatcgagagcaacggtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacgaggtacatcatcaacccggtc
aacgggacagtgcttctgtctgagaaggctccccttaatacaaaaattgctttgataacg
gtgatggacaaggatgctgatcagaatgggaaagtcacctgttttacagatcacgatgtc
cctttcaggctaaaaccagtgtttgataatcagtttctcttggagacagccacatttcta
gactatgaagctacgcgggaatacgccatcaaaatagtggcttcagattcagggaagcct
cccttgaaccagtctgcaatgctcctgatcaaaattaaagatgaaaacgacaacgcccca
gttttcacacagcccatcataggcctttccatccctgaaaacaacgctcctggcactcag
ctgaccaagatcagtgccacagatgccgacagcgggcggaacgccgagatcagctacatc
ctgggttccgacgcacccccaattttcaacctggaccgccgcacaggcatcctgacagca
gtgagaaagctggacagggaaaagcaagacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctacggtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacggatgctgacgcgggagacaacgccgcg
gtcaccctctctatcttaaatggcagagataatttcattatagatccacttactggtgta
ataagacctaatattacctttgatagggagcagcagggatcatataccttccaggtgaaa
gcagtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaacgataacaggcctgtttttgttattccctcatctaattactcctatgagttg
gtcccaacatcagccagcccagggtctgtggtcactaaagtctttgcagttgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatattactttgaaagagaaggtaatcgcatcagatcat
ggcttgcacagactggtgatcaaggtgaatgacctgggacagccggaatctctttacacc
atagctcttgtgcacttgtttgtgaatgagacagtcaccaacagctcctacgtgcaagag
ttagtgcgtaggaacatggaaactccagttggccagaacattggggatggtgagataacc
cctcagaccaatgactatgtcaagatcatcattgccataattgcaggcaccatgactgtt
attctggtaatttttgttaccgctttagtccggtgccgccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggcgagtgggtttcccccaaccaagagaacaggcagatc
aagaaaaagaaaaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagagtctaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cccgtagagctggaagagcagactatgggaaaatataactgggccaccacaccaaccacg
tttaaacctgacagcccagacttagcaaagcactacaagtcggcttctcctcagcctacc
tttcagattaaacccgagactcccgttccccccaagaagcaccatgtcattcaggaattg
cctctagacaacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcatacaaaagaagtgggaaggccacaaactcctttgaaagaaacc
accttggagccctggactcagccacaggtaggctggaacaactcttccaatcccttcttt
tccctagtgttggtttctgtaagaattcatggaaataatctgcaaagaaatgctgcaaca
ggttgttctgtggttcttctgtctcgtgtcaatatgatagaattgtag
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