Sylvia atricapilla (blackcap): 136374804
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Entry
136374804 CDS
T10263
Symbol
HCFC1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03083
Polycomb repressive complex
sati04980
Cobalamin transport and metabolism
sati05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136374804 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
136374804 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136374804 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136374804 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136374804 (HCFC1)
03029 Mitochondrial biogenesis [BR:
sati03029
]
136374804 (HCFC1)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136374804 (HCFC1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
136374804 (HCFC1)
HMT complexes
COMPASS/SET1 complex
136374804 (HCFC1)
MLL-HCF complex
136374804 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
136374804 (HCFC1)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
136374804 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
136374804
NCBI-ProteinID:
XP_066196295
LinkDB
All DBs
Position
Unknown
AA seq
1896 aa
AA seq
DB search
MAGLGGGGSPPRAPPGAPALQPRWKRVVGWAGPVPRPRHGHRAVAIKELIVVFGGGNEGI
VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA
SRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYV
LELRPGSGVLAWDIPITYGVLPPPRESHTAVVYTERDGRRSRLVIYGGMSGCRLGDLWTL
DIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT
LACLNLDSMAWEPLVLETLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPGRVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAPAPPPVPSVP
ANPPKSPAPAAPAPPPAAPALPQLGGVGLTLLPPPAAPPNPPGVAAGVTAGTAAGTGGAA
VAAAATAAAAGGGTGGAVAAPPGATLQVLPAAGGAPAAGAGAAAAGRAPGVPAVLKVTGP
PAATAGPPLVTVRSAGPGKAPVTVTSLPAGVRMVVPTQSPQGTVIGSSPQMSGMAALAAA
AAATQKIPPASAPTVLSVPAGATIVKTVAVTPGATTLPATVKVASSPVMVSNPATRMLKT
AAAQVGTAGASPAATNAATRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISV
PGGSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAGTILKLVTSGEG
KPTTILTSTQAGAGAAKPPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQSGATGVTSS
PGIKSPITIITTKVMTSGTGTPAKIITAVPKLGGGHGQQGVTQVVLKGAPGQPGTILRTV
PMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGAGGHSATASLAT
PITTLGTIATLSSQVLNPAAITATAAGGGLGTPTITMQPVSQPTQVTLITTPSGVEAQPV
HDLPVSILASPTAEGPPAATSGGGTLAEAPATEATPGTVTLVCSNPPCETHETGTTNTAT
TSLVANVGTGGGQQQLQLLCEDTGGGTTLPPPPRACSNPPCETHETGTTNTPTAAGTARL
GTPGAPPCPTQQTVATGTTMTARLCPPEGGSGGGVAGVTTQCQTQEATPCQTTPWGQPEV
GTAATGAVGTVATATTACETPAGSQLCSNPPCETHETGTTNTVTMTAARPPCANPPCETH
ETGTTNTVTVTGSQLCSNPPCETHETGTTNTVTTTGTRFCSNPPCETHETGTTNTVTMTS
SQLCSNPPCETHETGTTSTATTTTATSRPPPEPGTAVPPPPGVPSCSNPPCETHETGTTN
TVTMTSSQLCSNPPCETHETGTTNTATTATAGSRPGDTTTATSAATTAATATTSATGGSP
PCANPSRETPESGTTSTATAGSPPCQSHQSGATSTATTAEGVTPPPPCATTAATSPPRAC
SNPPCETHETGTTATATTVTASMGASQDPPPPAANGQGEGETPLSEGGGPPVPPGTPSPG
PSSGTGTPQPRAVTTVTQSTPAPGPAVPTISSLTESPPAPPETPPTTTPTPPGDPHPPQD
PPSAPSPPAPEAPAAAEPAGSPEPLAVVVLPPAAGEGNPPEGLALPPELLAEAGGTGGPP
GLTPEELAVTAAAEAAAAAAASEEAQAQALAIQAVLQAAQQAVMGTSEPLEPGEPGGGPT
ELGGALGVAEGAGGAGGALPLVLTQQELAALVQHQQHLAEAGTPPAAPPAPPAPAPPPPA
APTPPQAAAPPPHLPTEALAPADSLNDPAGDTNGLGDLGTVPGGATPATLLPSPGDGLAP
SSAFVAPPGPTVAPSPAKLQAAAALAEVANGIESTP
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgggcgggggggggtccccgccgcgggcccccccgggcgcccccgcgctg
cagccgcgctggaagcgggtggtgggctgggctgggcccgtgccccggccccggcacggc
caccgagccgtggccatcaaggagctcatcgtggtcttcggcgggggcaacgagggcatc
gtggacgagctgcacgtctacaacacagccaccaaccagtggttcatcccggccgtgcgg
ggtgacatccccccgggctgtgctgcctacggctttgtgtgtgacgggacacggctcttg
gtgttcgggggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggcc
tccaggtgggagtggaagcggctgaaggcgaagacccccaaaaacgggccccccccttgc
ccccggctgggccacagcttctccctggtgggcaacaagtgttacctgttcggggggctg
gccaacgacagcgaggaccccaaaaacaacatcccccggtacctgaacgacctgtacgtg
ctggagctgcgcccaggctcgggggtgctggcctgggacatccccatcacttacggggtg
ctgccgccgccgcgggaatcgcacacggccgtggtgtacacggagcgcgacgggcggcgc
tcgcgcctcgtcatctacgggggcatgagcggctgcaggctgggggacctctggaccctc
gatattgagacgctgacgtggaacaaacccagcctgagtggggtcgctccccttccccgc
agcctccactcggccaccaccatcggcaacaagatgtacgtttttggggggtgggtgccc
ctggtgatggatgatgtgaaggtggcgacgcacgagaaggagtggaagtgcaccaacacc
ctggcctgcctcaacctggactcgatggcctgggagcccctggtgctggagaccctggag
gacaatgtcccccgggcgcgggccggacactgcgccgtggccatcgccacccgcctctac
atctggagcggccgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctgtggtacctggagacagagcgccccccggcgccgggccgggtgcagctggtgcgggcc
aacaccacgtcgctggaggtgagctggggcgcggtgcccacggccgactcatacctgctg
cagctgcagaagtacgagctgcccgccgcccccgcgccgccccccgtgccctcggtgccc
gccaacccccccaagagccccgcgcccgccgcccccgcgccgccccccgccgcccccgcc
ctgccccagctggggggcgtggggctcaccctgctgcccccgcccgccgcgccccccaac
ccgcccggggtggccgcgggggtgacggcggggacggcggcggggacgggcggcgccgcg
gtggcggccgcggccacggcggcggctgcaggaggggggacaggtggggcggtggccgcg
ccccccggggccaccctgcaggtgctgccggcggcgggaggggcgcccgcggcaggtgcg
ggagcggccgcggcggggagggcgccaggtgtccctgcggtgctgaaggtgaccggtccc
cctgcggccaccgcgggtcccccgctggtgacggtgcgctcggccgggcccggcaaggcc
ccggtgacagtgacatcgctgcccgccggcgtcaggatggtggtgcccacccagagcccc
cagggcacggtgatcggcagcagcccgcagatgagtggcatggcggcgctggcggcggcg
gccgcggccacccagaagatccccccggcctcggcgcccaccgtgctcagtgtccccgcc
ggggccaccatcgtcaaaaccgtggccgtcacccccggggccaccaccctgcccgccacc
gtcaaggtggcatcgtcacctgtcatggtgagcaaccccgccacgcggatgctgaagaca
gcggccgcccaggtgggcacggccggggcgtcccctgcggccaccaacgcggccaccagg
cccatcatcaccgtgcacaagtccggcacagtgacggtggcccagcaggcccaggtggtc
accaccgtggtcggaggggtcaccaagaccatcacactggtcaagagccccatctctgtg
ccggggggcagcgccctgatctccaacctgggcaaggtgatgtcggtggtgcagacgaag
ccggtgcagagctcggctgtcaccgggcaggcctcgagtggccccgtcacccagatcata
cagaccaagggtcccctgcccgcggggaccatcctgaagctggtgacgtcgggggagggg
aagcccaccaccatcctgaccagcactcaggcgggggcgggggcggccaagccccccacc
atcctgggcatcagcagcgtgtcccccagcaccaccaagcccgggaccaccaccatcatc
aaaaccatccccatgtcggccatcatcacgcagtcgggggctaccggtgtcaccagcagc
cccgggatcaagtcccccatcaccatcatcaccaccaaggtgatgacctcgggcaccggg
acccccgccaagatcatcacagctgtccccaagctgggtgggggacacggccagcagggc
gtgacacaggtggtgctgaagggggcgccaggacagccggggacaatcctgcggacggtg
cccatgggcggggtccggctggtcactcctgtcaccgtctcagccgtcaagcccacggtg
accaccctggtggtcaagggcaccactggtgtgaccacgctggggacggtgacagggaca
gtgtccaccagcctggcggggggcgcgggtggccacagcgccacggcctcgctggccacg
cccatcaccaccttggggacaatcgccaccctctcgagccaggtgctgaaccctgcggcc
atcacggccaccgcggccgggggcggcctggggacacccaccatcaccatgcagccggtg
tcccagcccacacaggtgacgctgatcaccacgcccagcggggtggaggcccagcccgtg
cacgacctccccgtgtccatcctggcgtccccgacggccgaaggtccccccgcggccacc
tccggcggtggcaccttggccgaggcccccgccaccgaggccaccccgggcactgtcacc
ctggtgtgctccaaccccccctgcgagacccacgagacggggaccaccaacacggccacc
accagcctggtggccaacgtggggacaggagggggacagcagcagctgcagctgctctgc
gaggacacgggcggggggacgacgctgccaccgcccccgcgggcctgctccaaccccccc
tgcgagacccacgagacggggaccaccaacacgcccacggcggcggggacggcgcgcctg
gggacaccgggggccccgccctgtcccacgcagcagacggtggccacggggaccacgatg
acggcgcggctgtgcccccccgaaggtggcagcggtggcggcgtcgccggtgtcaccacc
cagtgccaaacgcaggaggccaccccgtgccaaacgacgccctggggacagcctgaggtg
gggacagcggccaccggggccgtggggacagtggccaccgccaccacggcgtgtgagacc
ccagcggggtcacagctgtgctccaacccgccctgtgagacccacgagacggggacgacc
aacacggtgacaatgacagcagcaaggccaccctgtgccaacccgccctgtgagacccac
gagacggggacaaccaacacggtgacagtgacagggtcacagctctgctccaaccctccc
tgcgagacgcatgagacggggacaaccaacacggtgacaacgacggggacacggttctgc
tccaacccgccctgtgagacccacgagacggggacaaccaacacggtgacaatgacatcg
tcacagctctgctccaatcccccgtgtgagacccacgagacggggacaaccagcacggcc
accaccaccacggccacctcgcgtcccccgccggagccggggacagcggtgccaccaccg
ccgggtgtcccctcctgctccaaccccccctgcgagacccacgagacggggaccaccaac
acggtgacaatgacatcgtcgcagctctgctccaaccccccctgcgagacccacgagacc
gggaccaccaacacggccaccacggccaccgcggggtcccggccaggtgacactaccacg
gccaccagcgctgccaccaccgccgccaccgccaccacctccgccacgggggggtccccg
ccttgtgccaacccctcccgtgagacccccgagagcgggaccaccagcacggccaccgcg
gggtccccgccctgccagagccaccagagcggggccaccagcacggccaccaccgccgag
ggggtgacaccgcccccgccctgtgccaccaccgccgccaccagccccccccgcgcctgc
tccaaccccccctgcgagacccatgagacggggacaacggccacggccaccacggtcacc
gccagcatgggcgccagccaagaccctcccccgccggctgccaacgggcagggggagggg
gagacccccctgagcgagggcgggggtccccctgtgccccccgggacccccagccccggc
cccagcagtggcaccgggaccccccagccccgggcggtcactacggtcactcagtccacg
ccagcgccggggccggccgtgccgaccatctcatcgctgaccgaatcccccccggcgccc
cccgagacccccccaaccaccacgcccacccctcccggagacccccacccaccgcaggac
cccccctcggccccgtcccctcccgcccccgaggcccccgctgcggccgagcccgccggg
tccccggagcccctggccgtggtggtgctgccgccggccgccggcgaggggaaccccccc
gaggggctggcgctgccccccgagctgctggccgaggcggggggcaccgggggacccccg
ggactgacccccgaggagctggcggtcaccgcggcggccgaagcggcggcggcggccgcg
gccagcgaggaggcgcaggcacaggctctggccatccaggccgtgctgcaggcggcgcag
caggccgtcatgggaacctcggagccgctggagcccggcgagcccggggggggccccacc
gagctggggggggccctgggggtcgccgagggggcggggggcgcggggggggcgctgccc
ctggtgctgactcagcaggaactggcggcgctggtgcagcaccagcagcacctggccgag
gccgggaccccccccgccgcccccccagcgccccccgcccccgccccaccccctcctgcc
gcccccacccccccccaggcggccgcgccccctccccatttgcccaccgaggccttggcc
cccgccgacagcctcaacgaccccgcgggtgacaccaacggcctgggggacctggggaca
gtgcccgggggggccacccccgccaccctgctgccctcccccggggacggcctggccccc
tcgagcgccttcgtggcccccccgggccccacggtggcccccagccccgccaagctgcag
gcggccgccgccctggccgaggtggccaacggcatcgagagcacccct
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