Sylvia atricapilla (blackcap): 136375020
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Entry
136375020 CDS
T10263
Name
(RefSeq) chondroadherin-like protein
KO
K06260
platelet glycoprotein V
K28877
leucine-rich repeat-containing protein 15
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136375020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136375020
04090 CD molecules [BR:
sati04090
]
136375020
Transporters [BR:
sati02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
136375020
CD molecules [BR:
sati04090
]
Proteins
136375020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_LRWD1
LRRCT
TMEM132_C
Syndecan
SAM_3
EA1
Mid2
Motif
Other DBs
NCBI-GeneID:
136375020
NCBI-ProteinID:
XP_066196472
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MGPMEQGGWQRWLLLLMGIQLASSQCPEQCNCVRSAQVECFGADITTVPSPIPANAMTLQ
IINTNIAELGDAAFGNASLLIGLRVEKNALSRISPGAFQNLPDLRYLSLASNKLQELPVQ
VFQPLDKLESLLLSSNQILQVEPSHFAHLSNLKELQLHGNNLKELQEGVFDQLTSLTKLN
LARNNIDRLPPRAFERLARLQVLRLYENRLRHIPVGAFDGLPELQELGLHQNQLETLSPE
LFVHNTNLQKLYLSNNLLTTLPSGVFLPLHALAKITLHVNRLRDISPSAFGPMPNLQELW
LYDNELSTLPTALFSNLTELQLLVLSKNRLRSVAPGAFQGLGELLELSLHSNALRRLDAR
ALEGLPKLQNISLHHNQLQALPRGLFGATPGLRNLQLHSNALEYLPAGIFSPLTALREVR
LHNNSWRCDKGILPLQGWLEENPHKVGEIPPLCAQPPAVQGIPITELPRDQFHDPQPPTA
APHPSTLLPADTSKAASPEEPSMEPPTGLPASPQEKEKKEEEEERGQWGLTRLQSGVVVA
VIVLVCVALLAALVALVVYGCRKKSHVVLMRMKAPNEASVRGSSAPAGKACPWLPIRPRN
TLSHLSKQHPCKSAADSATIPVMPHLCRLVIYKLLGLGSLLVGALSPSCPSTCQCYDNSK
VFCSNERMQEIPEGLPGSASHLFFVETALSNIHSGALGSSTTLTKLAFINNNIQELEAGA
FQGLPSLTELEVSGNPLSALSLGMLAGLTSLSKLSLRANAIRTLQPGLFTTSCCLQDLSL
SGNRIEALPSGIFHPLRQLQALDLSGNVLAELPGGLLTPLVSLRVLKLSDNLLARLPPGA
FRALGQLTELYLDGNRLEELPPGIFSGLGALQRLQLQHNALGSLAPDIFSGLLNLTVLSL
EGNNLATVPAILFTGTPGLLHLSLGRNQLETLPQELFANLSVLETLVLSHSAMNHLPTGV
FQGLAGLTELQLSHNNLSSLPARLLAGLPFLTALVLDHNCLARLPPGLFDASDDLMRVGL
SDNPWVCDCHLSYLLHWLQSFADPLIHGQAFCAKPAALQGQSLVEVSRGQLACPGAHGVP
PEEDWHTAAPGQCTYTNAEGTVSVACNATACQWRRLRLPAPGQGQGLGPLYRGTWELRSR
CGTLQVSVLVTAQSGNESAPPVLPTVP
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaatggagcagggaggctggcagcggtggctgctgctgctgatgggcatccag
ctggccagtagccagtgcccagagcagtgcaattgcgtccgtagtgcccaggtggagtgc
tttggtgctgacatcaccacggtgcccagccccatccctgccaacgccatgaccctgcag
atcatcaacaccaacatcgccgaactgggtgacgccgccttcggcaacgcctccctgctg
atcgggctgcgcgtagagaagaacgccctgtcacgcatcagcccgggggccttccagaac
ctgcctgacctgcgctacctcagcctggccagcaacaagctgcaggagctccctgtgcag
gtctttcagcctctggacaagctggagtctctgctcctctcaagcaaccagatcctccag
gtcgagccttcccacttcgcccatctgagcaacctcaaggagctgcagttgcacgggaac
aacctgaaggagctgcaggagggggtgtttgaccagctgaccagcctcaccaaactcaac
ctggccaggaacaacattgaccgcctgccgccccgggccttcgagcggctggcgcggctg
caggtgctgcggctctacgagaaccggctccggcacatcccagttggtgcctttgatggg
ctgccggagctgcaggagctggggcttcaccagaaccagctggagacgctgtccccggag
ctctttgtgcacaacaccaacctgcagaagctctacctgtccaacaacctcctcaccact
ctgccgagcggcgtcttcttgcccctgcacgctctcgccaagatcaccctgcacgtcaac
cgcctgcgggacatctcccccagtgcctttgggcccatgcccaacctgcaagagctctgg
ctttatgacaacgagctttccaccctccccactgccctcttcagcaacctcaccgagttg
cagctcctggttctcagcaagaaccggctgcggtcggtggcaccgggggctttccagggc
ctgggggagctgctggagctgtcgctgcactccaatgccctgcgccgcctggatgcccgg
gcactggaggggctgcccaagctgcagaacatctctctgcaccataaccagctgcaggca
ctgccacggggcctcttcggggccacccctgggctgcggaacctgcagctgcactccaat
gccctggagtacctgcctgccggaatcttctccccgctgactgccctgcgagaggtgagg
ctgcacaacaactcctggcgctgtgacaagggcatcctgcccctgcagggctggctggag
gagaaccctcacaaggtgggtgagatccccccactgtgtgcccagcctcccgccgtgcag
ggcatccccatcaccgaactgccacgggaccagttccacgacccccagccccccactgct
gcgccccatcccagcaccctgctccctgctgacacctctaaggcagcatcaccagaagag
ccctcgatggagccccccacagggctgccagcctccccacaggagaaggagaagaaggag
gaggaggaagagagggggcagtgggggctaacacgcctgcagagtggggtggtggtagca
gtcatcgtgctggtgtgtgtggccctgctggctgctctggtggcactggtggtctatggc
tgtaggaagaagagccatgttgtgctcatgaggatgaaggctccaaatgaagcctcagtg
aggggcagctccgccccagcaggaaaagcttgtccctggcttcccatccgccccagaaac
acactgtcccatctcagcaagcagcatccctgcaaatctgctgcagattctgcgaccatc
cccgtgatgccacacttgtgcaggctggtgatctacaagttgctggggctggggtccctg
ctggtgggggcactgtccccatcctgcccctctacctgccagtgctatgacaactccaaa
gtcttctgctcaaatgaaagaatgcaagagatccccgagggcctgccgggaagtgccagc
cacctcttcttcgtggagacagccctgagcaacatccacagcggggctttgggctccagc
accaccctcaccaagctggccttcatcaataacaacatccaggagctggaggctggtgcc
tttcaggggctgcccagccttaccgagctggaggtgtcaggcaaccctttgtcagctctc
agccttgggatgctggcagggctgaccagcctcagcaagctctccctcagagccaacgcc
atccgcaccctgcagccagggctcttcactacctcttgctgcctgcaggacttgagcttg
tcagggaacaggatcgaggccctgccctccggcatcttccacccactccggcagctccag
gccctggacctctcagggaatgttctggctgagttgccaggtgggctgctaaccccactt
gtctcccttcgtgtcctcaagctcagtgacaacctgctggcacggctgcctcctggtgct
ttcagggcacttggccagctgactgagctctacctggatggcaaccggctggaggagctg
ccccccggcatcttctccgggctgggggcactgcagcggctgcagctgcagcacaatgcc
ctgggcagcctggcccctgacatcttctcaggtctcctcaacctcactgtcctcagcctg
gagggcaacaacctggccaccgtgcctgccatcctgttcactggcacccctggcctcctc
cacctctcactgggtcgcaaccagctggagacactgccccaggaactctttgctaacctg
tcagtgctggaaaccctggtgctctcacacagtgccatgaatcacttgcccactggggtt
ttccaggggctggcagggctgacagagctacagctgagccacaacaacctctccagcctg
ccagcaaggctgctggctgggctgcccttcctcaccgccctggtgctggaccacaactgc
ctggcccgcctgcccccggggctctttgatgccagcgatgacctgatgcgtgtggggctg
tctgacaacccctgggtctgtgactgccacctctcctacctcctgcactggctccagagc
tttgctgatcccctcatccacggccaagccttctgtgccaaaccagctgctctccagggc
cagtccctggtggaggtctcccgcgggcagctggcgtgcccgggagcacacggtgtccct
ccagaggaagactggcacacagctgccccggggcaatgcacctacaccaacgccgagggc
actgtcagcgtggcctgcaatgccacggcctgccagtggcgcagacttcgcctccctgcc
ccgggccagggccagggcctggggccactctaccggggcacctgggagctgcgctcccgc
tgcggcacgctgcaggtcagtgtccttgtcacggcacagagcgggaacgagtccgcacca
ccagttctccccacggtgccctaa
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