Sylvia atricapilla (blackcap): 136375063
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Entry
136375063 CDS
T10263
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04136
Autophagy - other
sati04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136375063 (ATG4D)
04136 Autophagy - other
136375063 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sati01002
]
136375063 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136375063 (ATG4D)
03029 Mitochondrial biogenesis [BR:
sati03029
]
136375063 (ATG4D)
Peptidases and inhibitors [BR:
sati01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
136375063 (ATG4D)
Membrane trafficking [BR:
sati04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
136375063 (ATG4D)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136375063 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
136375063
NCBI-ProteinID:
XP_066196516
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MSGGGEGPGPPPAPEPAPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRD
PLYLLGRVYRPGNGEELARFRRDFCSRLWLTYRSGFPALPGTLRTTDCGWGCTLRSAQML
LGQGLLLHLLGRDWVWPEALRELEPGGPRRSRDPSGRARDPRDGPRVPGDGHGTPRTDMG
PSGRTRDPSGRTQDPSGRTRPSQNGRGPPRMDTGPPRMDTESSGGTRDPPGQLRDPPGQL
RDPPGQLRDPPGQLRDPPGAPRAPREAEQRHRAIVSWFSDHPRAPFGIHRLVELGREFGK
GAGDWFGPAIAAHLLRAAVESCTETPGLAVYVAQDCTVYKGDVARLVQAPEPRQRRGLVL
LVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLYFLGFQGDSLLYLDPHLCQP
CVDTARENFPLQSFHCCFPRKMSFGKMDPSCTFGFYARGTELEQLWGDLAWVLAAPRAPE
RYPIFTLAEGRAQALDAPLGPPPPLPRRGKRPKKPTSDEFVFL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggggggggagggaccggggccccccccggcaccggaaccggcaccggcaccg
ggacccccccccggggccgagcggggcgggcagcgcgtgcggggccgagtcctggcggcc
tggaacagcgtcaaatacggctggacgctgcggccgcggccccacttcagcccgcgggac
ccgctgtacctgctggggagggtctacagaccggggaacggcgaggagctggcgcggttc
cggcgggatttctgctcccggttgtggctcacgtaccggagcgggttcccggcgctgccc
gggaccctccggaccaccgactgcggctggggctgcaccttgaggagcgcgcagatgctg
ctgggccaggggctgctgctgcacctgctgggccgagactgggtgtggccggaggcgctg
cgggagctggagccggggggaccccgcaggagccgcgacccctcgggacgggcacgggac
ccccgggatgggccgagggtccccggggatggacacggcacccccaggacggacatggga
ccctccgggcggacgcgggacccctcgggacggacccaggacccctcgggacggacgcga
ccctcccagaatggacgcggaccccccaggatggacacgggaccccccaggatggacacg
gaatcctccggggggacacgggaccccccgggacagctccgggaccccccgggacagctc
cgggaccccccaggacagctccgggaccccccgggacagctccgggaccccccgggcgcc
ccccgcgccccccgggaggcggagcagcggcaccgcgccatcgtgtcctggttctccgac
cacccccgcgccccgttcgggatccaccggctggtggagctgggccgggagttcggcaaa
ggcgccggggactggttcggtcccgccatcgccgcccacctcctgcgggcggccgtggag
tcctgcacggagacccccgggctcgccgtctacgtggcccaggattgcaccgtttacaaa
ggggacgtggccaggttggtgcaggcaccggagccaaggcagcgccgcgggctcgtcctg
ctggtgccggcgcgtttggggggcgagagcctgaaccccgtgtacgtggagtgtgtcaag
gagctgctgcagctccgctcctgcctcggcatcatcggggggaagccgcggcactcgctt
tacttcctgggcttccaaggggattccctgctctatctggacccgcacctctgccagccc
tgcgtggacacggcccgggagaacttcccgctgcagtcgttccactgctgcttcccgcgg
aaaatgtccttcgggaagatggatcccagctgcaccttcggcttctacgcccgcgggacg
gagctggagcagctctggggggatctggcctgggtgctggccgccccccgggctccggag
cgttatcccatcttcaccctggccgagggtcgcgctcaggctctggacgcccccctgggg
ccgccccctcccctcccccgccgcgggaaacgccccaaaaaacccacctcggatgagttc
gttttcctgtga
DBGET
integrated database retrieval system
