Sylvia atricapilla (blackcap): 136375286
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Entry
136375286 CDS
T10263
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sati00536
]
136375286
Glycosaminoglycan binding proteins [BR:
sati00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
136375286
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Dam
Motif
Other DBs
NCBI-GeneID:
136375286
NCBI-ProteinID:
XP_066196815
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All DBs
Position
2:5127051..5179059
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AA seq
1378 aa
AA seq
DB search
MFGFMWKIFLCLPGMINTDLQIVAAEAYSAAGGGQAKDVSPAPQLSDWQLANPSLPPGLE
KPNGIMDAEQFHRHLQSRRKRSILFPSGVKICPDESVEQAIANHLKYFRLRVCQETIWEV
FKTFWDRLPEREEYNTWMSLCEEGVMSIFEMGTNFSQSEEHRSLVVKKLAYIKEAMGSSC
ADWSCGSNGTPTPPLDADVTTLRDAAANVPPPHEVSIQSPVDDTVHDHDNVDTTINNEIK
KQDEKLVRPVTEQMIEFNILIVGEQYSEELKDPSAAEYQQLSERFISQIKSVFERLPGYK
NIHILDYSGVEVHYAVTFDGKAISNATWDLINLHSNKVEDNSFMGIEDNPTVVYTISDFR
DYIAEILQKNALLENASISLDPNSLQLTNVKEILHPTSEDSSWITEHPVVLERPEFDDST
FLAERPSADESTVSNALPFDYTKPDSTSDSEQSSDNEIQPRPDNIDYEASLPPEAPLSSE
ADVTSLPDGQNLETSHLVTVPVLQPDSVDSLEWLSAPSSLDVFEDTELSEELLPLSPSHL
VPEDSPSTDDSAVPLLSAPTVTSSSVVETDIKEKEEVIQGSPEGSDSADSVEEIPFPLEV
SPMEDETDIFFGDRVIYDDGSGSAFDGSGKEMESSIWPWEEATLEPVFYPGPDSWLEDDN
ESLLIKTEDIPEGMILDYILNSGNKLDYDLSKDENEGIVNIKDFLDESEIFVFPETTTLQ
VPLLQTEEPSSVEPSTQTETLGMFDSSFVMPTGEAPVSPPYTDLSVEDSLQTSTGTVSME
QPEESSVGQNIIPEVVEHQSEDRTVVEELFTVKQPDVMEAATIGHLDTISLETILTADPS
VVKPGASTEEQQALDSSLADQATPGSAVKEPADGWPTDRALETSLDQTVQPAIPAATEGT
AAAPSVIDHGTVPEGFAGQDATDHDTHISMSFSTAVDYQTVSVTTSPVELPSHLPPVGST
PSLSVATSANLGDETGVLDVSADLGQVSTVHFSPEQTEEGRRMTESHMELTTRVQSTEMA
SVAWATHETHYSSTVPSRALVVFFSLRVTNMMFSEDLFNKNSPEYKALEQRFLELLVPYL
QSNLTGFQNLEILNFRNGSIVVNSRMKFAKPVPRNVTNAVYMILEDFCNTAYHTMNLAID
KYSLDVESGEQADPCKFQACNEFSECLVNRWSGEAECVCNPGYLSIDGLPCNSICDLQPN
FCLNDGKCDISPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASAV
IFFLARTLRDQYTKSDTGDSQGQGDSLSSIENAVKYNPMYESDTTGYSHYYRRYPQLTSY
SSTSAETSTDYSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFAEFVRQHQMKLL
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcttcatgtggaaaatctttctttgccttccgggaatgattaacacagatctt
caaatagttgcagcagaagcttattcagctgcaggaggaggacaggctaaagatgtttca
ccagcccctcagctcagtgactggcagttggcaaacccttctctgcctcctgggttggaa
aagcctaatggcatcatggatgctgagcagttccacaggcatttgcagtcacgaaggaag
cggtccattctgtttcccagcggagttaagatctgccctgatgaatctgttgagcaggct
attgccaaccatctgaagtatttcaggctcagagtgtgccaggaaacaatctgggaggtc
ttcaagacattctgggacagactgccagagcgtgaagagtacaacacctggatgagcctg
tgtgaggaaggtgtgatgagtatctttgagatgggcaccaacttcagccagtctgaggag
caccgcagcctggtcgtgaagaaactggcctatataaaggaagcaatgggcagttcctgt
gctgattggtcatgtgggagtaatgggactcctactccacctttggatgctgatgttacc
acattgagagatgcagctgccaatgttcctccccctcatgaggtctccatccagagtcct
gtggatgacactgtccatgaccatgacaatgtagataccactatcaataacgagataaag
aagcaggatgaaaagctggtcagacctgtaactgagcagatgattgagttcaacattctg
attgttggtgaacagtacagtgaggagctgaaggacccatctgctgctgagtatcaacag
ctgtcggaacgattcatttctcagattaaaagcgtatttgaaagactacctggatacaaa
aacatccatatcctggattacagtggggtggaagttcactacgctgtcacatttgatgga
aaagccatcagcaatgccacctgggacctgattaacctccattcaaacaaggtggaggac
aactccttcatgggcatagaggataatccaacagttgtgtacaccatcagtgatttccga
gattatattgctgagatcctccagaaaaatgctctgcttgaaaatgcttccatctcctta
gacccaaactctcttcagcttactaatgtgaaggaaatactgcatcccacatcagaggac
tcatcctggattactgagcatccagtcgtgctggagcgcccagagtttgatgacagcacc
tttttagctgaacgtccttctgcagatgagtcaactgtcagcaatgccttgccctttgat
tacaccaaaccagactccacctcagacagtgagcagtccagtgacaatgaaatccagcca
agaccagacaacattgactatgaggccagtttgccacctgaagctccactttcctcagag
gctgatgtcacttctttgcctgatgggcagaatttagagacttctcatttagtcactgta
ccagtgctacagcctgattctgtggactctctggaatggctttcagcccccagttcttta
gatgtgtttgaagatactgaactatctgaagaacttttgcctttaagtccttctcacctt
gtgcctgaagattctccatctactgatgactctgcagttcctctgctttctgcaccaaca
gtgacctcttcatcagtcgtagagactgatattaaagaaaaggaagaagtaatccaaggt
agtcctgagggcagtgacagtgcagactctgtggaagaaattccttttcccttagaagtg
tcccctatggaagacgaaactgatatattttttggagatagagttatatatgatgatggg
tctggttcagcttttgatggttcaggaaaagaaatggaatcaagtatctggccttgggaa
gaagcaaccctggaaccagttttctaccctggtcctgatagctggcttgaagatgacaat
gagtctttgttaatcaaaactgaggatattcccgaaggcatgattttagactatattctt
aactctgggaataaattagattatgatctttccaaagatgagaatgaagggatagtcaat
ataaaagatttccttgatgagtctgaaatatttgtctttccagagactacaactctgcaa
gtacctctgttacagacagaagagccctcgtctgtggaaccatctacacagacagaaaca
ctgggcatgtttgattcttcttttgtcatgccaactggagaggcccctgtctcaccacca
tatacagatctgtctgtggaagatagtctccaaacatctacaggcactgtcagtatggag
caacctgaggagtctagtgtaggccagaacataatccctgaagtagttgaacatcaaagc
gaggacaggacagtggtagaagaactattcacagtgaagcagccagatgtaatggaagct
gctacaataggacacttggacacaatctctttagaaactattctgactgcagatccttct
gtggtaaagcctggtgcttccacagaagagcagcaagccctggattcatcactggcagac
caagccactcctggatcagcagtgaaggaaccagctgatggttggcctactgacagggca
ctagaaacctccttagatcagacagtgcaaccagcaataccagcagctactgaaggtaca
gctgcagctccttctgtaatagatcatggcactgtcccagagggctttgctggacaggat
gctacagaccatgacacacatatttccatgagcttcagcactgctgtggattatcaaaca
gtgagtgtaacaacaagccccgttgagcttccatcccaccttcctcctgtgggctccaca
ccatcattgtctgtggctacctcagcaaatctgggagatgaaacaggagtcctggatgtt
tcagcagacctgggtcaggtcagcactgtccacttttctcctgagcagactgaggaggga
aggaggatgactgaaagtcacatggagctaacgactcgtgtccagtccacagagatggcc
agtgtggcttgggccacacatgaaactcactacagtagcactgtcccatcccgagctctg
gttgtgttcttcagccttcgggttaccaacatgatgttttcagaggacctgtttaataaa
aactcccctgaatacaaagccttggagcagcgattcctggagctgctggtgccctacctt
cagtcaaatctgacaggattccagaatctggaaatcctgaacttcagaaatggcagcatt
gtggtgaacagtcgtatgaaatttgccaaacccgtgcctcggaatgtcactaacgctgtg
tacatgatcctggaagatttctgcaacactgcatatcacaccatgaacctggccattgat
aaatactccctggatgtggaatcaggtgagcaagcagatccctgcaagttccaggcctgc
aatgagttctctgagtgcttagtcaaccgctggagtggggaggctgagtgtgtctgcaat
cctggctacctcagcatcgacgggctgccgtgcaacagcatttgtgacctgcagccaaac
ttctgcctcaacgatggcaagtgtgacataagccctgggcaaggggccatctgtaggtgc
cgtgtgggagagaactggtggtacagaggggagcactgtgaggaatacgtgtcagagcca
ctggttgtgggcattgcaattgcttctgtggcaggattccttcttgtggcctctgctgtc
atcttcttcttggccaggacccttcgagaccagtacacaaagagtgatactggggactcc
caggggcagggtgacagcctctcgtccattgagaatgcagttaaatacaaccccatgtat
gaaagtgacacgactggctacagccattattaccggagatatccgcagctaacgtcctac
agttccaccagtgcagagacatccacagactacagcagtgaagagatcaggcacatttat
gaaaacagtgagcttactaaggaggaaattcaggacagaattcgaattatagagctctac
gctaaagaccgccagtttgcagagtttgttaggcagcatcaaatgaagctgctttaa
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