Sylvia atricapilla (blackcap): 136375425
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Entry
136375425 CDS
T10263
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
sati Sylvia atricapilla (blackcap)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
136375425
NCBI-ProteinID:
XP_066197042
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Position
2:19929064..19934738
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AA seq
768 aa
AA seq
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MITACPNGDCTSQKTISCQLCVLWCCSQVMVMLLFPVQLLAVAVTVYLELVRSAQGGAYY
GIKQLPPQVPQYQPLGQQVPHMPLGKEGIPMQHLGKEVPHMPYGKEYPHLPQYRKEVPQM
PMLGKDMAPKKEKEIPMRSLRGEQGPPGEPGPRGPPGPPGLPGHGVPGAKGKPGPQGYPG
IGKPGLPGMPGKPGVMGPPGPRGEMGPKGEIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQ
GQPGPKGEPGMKGPPGIPGIPGPKGEKGVGIPGLPGLKGPPGLPGPPGPVGLPGVGKPGM
VGFPGPQGPLGKPGPPGELGLQGPPGAPGIQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQ
GLPGLPGPPGLPGVGKPGFPGPKGERGVGGLPGPLGPKGEKGHAGPPGMGGPPGEPGQPG
LPGIMGPPGAAGFPGPKGEGGAVGPPGPVGPKGEPGLQGFPGKPGFPGEVGGPGLRGLPG
PTGPKGEAGHKGLPGLPGVPGLVGPKGEPGLPGAQGLQGPSGIPGIAGPSGPIGPPGLPG
AKGEPGMPGPPGFPGVGKPGAAGLQGPPGKPGPLGPPGQPGLQGPPGPPGPPGPPVVIPP
TPPAVGQYLPEAGPGIDGLKPPYGYKGKKGKAGGVVYEMPAFTAELLTPFPRVGVPVKFD
KLLYNGRQNYNPQTGIFTCEIPGVYYFAYHVHCKGANVWVALYKNNEPLMYTYDEYKKGF
LDQASGSAVVPLMHGDKVYVQMPSEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgataacagcttgtcctaacggggattgcacatcacaaaaaaccatctcctgccaactg
tgtgttttgtggtgctgttcacaggtgatggtcatgctgctcttccctgtgcagctgctg
gcggtggctgtcactgtttacctagagctggtgaggtctgctcaaggtggtgcctactat
gggatcaagcagctgccacctcaggtgccccagtaccaacccctcggacaacaagtacct
cacatgccgctgggcaaagaaggcatcccgatgcagcacctgggcaaggaggtgccccac
atgccttatgggaaggagtacccccacctgccccagtacaggaaggaggtcccgcagatg
cccatgctcggcaaggatatggctcccaagaaagagaaagaaattcccatgcgcagtctg
aggggtgaacaaggccccccgggtgagcctggaccaagagggcctccagggccaccagga
ttaccaggtcacggtgtaccaggagccaaaggaaaaccaggcccacaaggatacccagga
attggaaagccgggtttgccagggatgccaggaaaaccaggggtcatggggcccccaggg
ccaagaggggagatggggccgaagggggagattgggcccatggggattcccggaccacag
gggccaccagggcctcatgggcttcccggcatagggaaagcaggtgccccggggctgcag
ggccaaccggggccaaagggcgagcccgggatgaaggggccaccaggaatccccgggatc
ccagggccgaaaggggagaagggggtggggatcccaggcttgccgggtctgaagggtccg
cctgggctgcccggtccccccggccccgtggggctgccgggggtcggcaaaccgggcatg
gttggtttccccggcccacagggacccctgggcaaacccggccccccaggcgagttaggg
ctgcaggggccgccaggggcccccgggatccaaggccctcccggcccgcccggcattggc
aaaccgggccaggacggcatgcccggccagcccggcttcccgggcggcaagggggagcag
ggactgccgggcctcccggggccccccggcctcccgggggtcgggaagccgggcttcccc
gggcccaaaggcgagcgaggcgtgggcggtctgcccgggcccctggggccgaagggggag
aaggggcacgcggggccgcctggcatgggagggccgccaggggagcccggccagccgggg
ctgccgggcatcatgggccccccgggggccgccggcttcccgggacctaaaggggaggga
ggtgccgtagggccgccgggaccggtcggtcccaagggagaacccggcctgcagggtttt
ccgggaaaaccaggctttcctggggaagtgggtggccctgggctgcgggggctgccgggc
cccacaggacccaagggggaggccggacacaaaggcctgccggggctgcctggtgtccca
gggcttgtggggccaaagggcgagcccggcctccccggcgcccaggggcttcagggcccc
tcgggcatcccgggcatcgcggggcccagcggccccatcggtccgcccgggctgccaggg
gcgaagggcgagccgggcatgcccgggcccccaggcttccctggggtgggcaaacctggg
gctgcggggctgcaaggacccccgggaaagccggggccgctcggtcctcccggccagccg
gggctccaggggccgccgggcccccccgggccccccgggcccccggtcgtcatcccgccc
accccaccggccgtgggccagtacctgccggaggcgggcccggggatagacggcctgaag
cccccctacggctacaagggcaagaaaggcaaggctggcggcgtcgtctacgagatgccc
gcgttcacggcagagctcctcacgcccttcccccgcgtcggggtgcccgtgaagttcgac
aagctcctgtacaacgggcggcagaactacaacccgcagacgggcatcttcacctgcgag
atccccggcgtctactacttcgcctaccacgtccactgcaaaggcgccaacgtgtgggtg
gcgctgtacaagaacaacgagccgctcatgtacacctacgacgagtacaagaagggcttc
ctggaccaggcttcgggcagcgccgtggtgccgctcatgcacggagacaaggtttacgtt
cagatgccgtccgagcaggcggcaggactctatgccgggcagtacgttcattcgtctttt
tcagggtatttattgtatcccatgtaa
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